RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 TDRD7Q8NHU6 1098 aaKnown RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 FAM133BQ5BKY9 247 aaKnown RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 C9orf78Q9NZ63 289 aaPredicted RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 NOP14P78316 857 aaKnown RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 ENAHQ8N8S7 591 aaPredicted RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 C10orf88Q9H8K7 445 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 ATP1A2P50993 1020 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 TCERG1LQ5VWI1 586 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 TMTC1Q8IUR5 882 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 HELLSQ9NRZ9 838 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 KIF21AQ7Z4S6 1674 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 GNAT1P11488 350 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.76□□□□□ -1.015e-7■□□□□ 9.8
RSF1-201ENST00000308488 CCDC26Q8TAB7 109 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 TANGO6Q9C0B7 1094 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 KCNK9Q9NPC2 374 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 MYO1AQ9UBC5 1043 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 CAMSAP2Q08AD1 1489 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 TULP2O00295 520 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 ZC3H18Q86VM9 953 aaKnown RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 C8orf76Q96K31 380 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 MRPS35P82673 323 aaKnown RBP8.76□□□□□ -1.01
RSF1-201ENST00000308488 PSME1Q06323 249 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 LRMPQ12912 555 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 MYSM1Q5VVJ2 828 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 CYP26C1Q6V0L0 522 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 DNA2P51530 1060 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 SLC4A8Q2Y0W8 1093 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 MIEF2Q96C03 454 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 SIL1Q9H173 461 aa8.76□□□□□ -1.01
RSF1-201ENST00000308488 CEP70Q8NHQ1 597 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 FANCCQ00597 558 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 KRT71Q3SY84 523 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 HMG20BQ9P0W2 317 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 TACC3Q9Y6A5 838 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 MTIF2P46199 727 aaKnown RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 HIBCHQ6NVY1 386 aaPredicted RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 ZNF710Q8N1W2 664 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 CATSPER2Q96P56 530 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 TOP2AP11388 1531 aaKnown RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 IDEP14735 1019 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 PDP2Q9P2J9 529 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 PHEXP78562 749 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 RNASELQ05823 741 aaKnown RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 PARVBQ9HBI1 364 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 ATP5HO75947 161 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 MYL5Q02045 173 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 ZGPATQ8N5A5 531 aaKnown RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 SURF6O75683 361 aaKnown RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 CYLC2Q14093 348 aaPredicted RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 BRAPQ7Z569 592 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 HVCN1Q96D96 273 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 CHRM1P11229 460 aaPredicted RBP8.75□□□□□ -1.01
RSF1-201ENST00000308488 KRT4P19013 534 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 PHBP35232 272 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 IGSF22Q8N9C0 903 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 NCAPD3P42695 1498 aa8.75□□□□□ -1.01
RSF1-201ENST00000308488 PRC1O43663 620 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 MAFGO15525 162 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 CHMP2AO43633 222 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 NOP2P46087 812 aaKnown RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 FBXW10Q5XX13 1052 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 C16orf87Q6PH81 154 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 PARD6BQ9BYG5 372 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 ZFATQ9P243 1243 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 MAPKBP1O60336 1514 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 ECM2O94769 699 aaPredicted RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 PRPF40BQ6NWY9 871 aaKnown RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 SH2D4AQ9H788 454 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 CCT6AP40227 531 aaKnown RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 ELL2O00472 640 aaPredicted RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 CTCFP49711 727 aaPredicted RBP8.74□□□□□ -1.01
RSF1-201ENST00000308488 CASP8Q14790 479 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 PLVAPQ9BX97 442 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 ERBINQ96RT1 1412 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 DDX21Q9NR30 783 aaKnown RBP eCLIP8.74□□□□□ -1.01
RSF1-201ENST00000308488 TBC1D23Q9NUY8 699 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 KRT75O95678 551 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 HIC2Q96JB3 615 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 TSG101Q99816 390 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 RMND1Q9NWS8 449 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 CCDC93Q567U6 631 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 TRIM74Q86UV6 250 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 TRIM73Q86UV7 250 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 USP26Q9BXU7 913 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 RHBDL2Q9NX52 303 aa8.74□□□□□ -1.01
RSF1-201ENST00000308488 DENND2CQ68D51 928 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 FAM81AQ8TBF8 368 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 ATP2A3Q93084 1043 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 CCDC42Q96M95 316 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 HOMER2Q9NSB8 354 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 SIKE1Q9BRV8 207 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 FAM43BQ6ZT52 329 aaPredicted RBP8.73□□□□□ -1.01
RSF1-201ENST00000308488 TRIML1Q8N9V2 468 aa8.73□□□□□ -1.01
RSF1-201ENST00000308488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
RSF1-201ENST00000308488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.014e-10■■■□□ 15.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms