RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DRC1Q96MC2 740 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 HSF2BPO75031 334 aa18.02■□□□□ 0.47
USP42-201ENST00000306177 CEP112Q8N8E3 955 aa18.02■□□□□ 0.47
USP42-201ENST00000306177 SYNCQ9H7C4 482 aa18.02■□□□□ 0.47
USP42-201ENST00000306177 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.47
USP42-201ENST00000306177 NEK11Q8NG66 645 aa18.02■□□□□ 0.47
USP42-201ENST00000306177 FAM107BQ9H098 131 aa18.02■□□□□ 0.47
USP42-201ENST00000306177 VWA3AA6NCI4 1184 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 PHKG2P15735 406 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 DDX12PQ92771 950 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 IMPG2Q9BZV3 1241 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 PRDM10Q9NQV6 1147 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 MYL5Q02045 173 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 ZNF174Q15697 407 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 ARFGAP3Q9NP61 516 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 MRVI1Q9Y6F6 885 aa18.01■□□□□ 0.47
USP42-201ENST00000306177 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
USP42-201ENST00000306177 SAP30BPQ9UHR5 308 aaKnown RBP18■□□□□ 0.47
USP42-201ENST00000306177 ANO1Q5XXA6 986 aa18■□□□□ 0.47
USP42-201ENST00000306177 AATKQ6ZMQ8 1374 aa18■□□□□ 0.47
USP42-201ENST00000306177 POLD1P28340 1107 aa18■□□□□ 0.47
USP42-201ENST00000306177 PLCD1P51178 756 aa18■□□□□ 0.47
USP42-201ENST00000306177 UBE4AQ14139 1066 aa18■□□□□ 0.47
USP42-201ENST00000306177 RNF187Q5TA31 235 aaPredicted RBP18■□□□□ 0.47
USP42-201ENST00000306177 CERS3Q8IU89 383 aa18■□□□□ 0.47
USP42-201ENST00000306177 SH2D4AQ9H788 454 aa18■□□□□ 0.47
USP42-201ENST00000306177 CALCOCO1Q9P1Z2 691 aa18■□□□□ 0.47
USP42-201ENST00000306177 SLU7O95391 586 aaKnown RBP18■□□□□ 0.47
USP42-201ENST00000306177 LETM2Q2VYF4 491 aa18■□□□□ 0.47
USP42-201ENST00000306177 USP44Q9H0E7 712 aa18■□□□□ 0.47
USP42-201ENST00000306177 PREX2Q70Z35 1606 aa18■□□□□ 0.47
USP42-201ENST00000306177 TAF5LO75529 589 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 TCHPQ9BT92 498 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 MROH5Q6ZUA9 1318 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 PPP1R2P41236 205 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 KDM5CP41229 1560 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 NF2P35240 595 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 ARID5AQ03989 594 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 PLS1Q14651 629 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 SV2BQ7L1I2 683 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 PLIN2Q99541 437 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 GGA1Q9UJY5 639 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 RBM26Q5T8P6 1007 aaKnown RBP17.99■□□□□ 0.47
USP42-201ENST00000306177 WDR66Q8TBY9 1149 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 RASAL2Q9UJF2 1139 aa17.99■□□□□ 0.47
USP42-201ENST00000306177 LUC7L2Q9Y383 392 aaKnown RBP17.99■□□□□ 0.47
USP42-201ENST00000306177 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
USP42-201ENST00000306177 CCDC155Q8N6L0 562 aa17.98■□□□□ 0.47
USP42-201ENST00000306177 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
USP42-201ENST00000306177 CNGA4Q8IV77 575 aa17.98■□□□□ 0.47
USP42-201ENST00000306177 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
USP42-201ENST00000306177 LMAN1P49257 510 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 CCDC65Q8IXS2 484 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 IKBKGQ9Y6K9 419 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 MAST3O60307 1309 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 ATP7BP35670 1465 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 SYNMO15061 1565 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 RPL13P26373 211 aaKnown RBP17.97■□□□□ 0.47
USP42-201ENST00000306177 GIGYF2Q6Y7W6 1299 aaKnown RBP17.97■□□□□ 0.47
USP42-201ENST00000306177 KRT222Q8N1A0 295 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 SPATA5Q8NB90 893 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 GOLGA1Q92805 767 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 TUBB4BP68371 445 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 PPP2R5BQ15173 497 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 NBPF14Q5TI25 921 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 SSH3Q8TE77 659 aa17.97■□□□□ 0.47
USP42-201ENST00000306177 V9GY48 417 aaPredicted RBP17.97■□□□□ 0.47
USP42-201ENST00000306177 HSPA4P34932 840 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 SPECC1LQ69YQ0 1117 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 KCNH3Q9ULD8 1083 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 NLRP1Q9C000 1473 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 KDRP35968 1356 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 ATP5JP18859 108 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 DIS3L2Q8IYB7 885 aaKnown RBP17.96■□□□□ 0.47
USP42-201ENST00000306177 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.47
USP42-201ENST00000306177 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.46
USP42-201ENST00000306177 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.46
USP42-201ENST00000306177 GUCA1BQ9UMX6 200 aa17.96■□□□□ 0.46
USP42-201ENST00000306177 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 TMEM94Q12767 1356 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
USP42-201ENST00000306177 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 ZCCHC11Q5TAX3 1644 aaKnown RBP17.95■□□□□ 0.46
USP42-201ENST00000306177 STAMBPO95630 424 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 ZAP70P43403 619 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 LZTFL1Q9NQ48 299 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 PRDM1O75626 825 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 RGS22Q8NE09 1264 aa17.95■□□□□ 0.46
USP42-201ENST00000306177 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP42-201ENST00000306177 CUTAO60888 179 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.94■□□□□ 0.46
USP42-201ENST00000306177 DSCC1Q9BVC3 393 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 263.2 ms