RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 NLRP12P59046 1061 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 NEXNQ0ZGT2 675 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 RESP18Q5W5W9 173 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 CC2D1AQ6P1N0 951 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 DHX32Q7L7V1 743 aaKnown RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 LRRC37AA6NMS7 1700 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 THSD7AQ9UPZ6 1657 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 COL1A1P02452 1464 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 ZBTB7CA1YPR0 619 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 MYO1BO43795 1136 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 RANBP6O60518 1105 aaKnown RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 AMPD2Q01433 879 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 KIF23Q02241 960 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 SH3RF1Q7Z6J0 888 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 STK11IPQ8N1F8 1099 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 SMARCE1Q969G3 411 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 OSBP2Q969R2 916 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 EPC1Q9H2F5 836 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 BOLA2Q9H3K6 86 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 SENP2Q9HC62 589 aa6.35□□□□□ -1.39
VPS50-202ENST00000305866 NCOA5Q9HCD5 579 aaKnown RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS50-202ENST00000305866 V9GYY5 206 aaPredicted RBP6.35□□□□□ -1.39
VPS50-202ENST00000305866 LTBP1Q14766 1721 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 UBE2Q2LH0YL09 131 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 EYA2O00167 538 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 ATP8B1O43520 1251 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 ARID4AP29374 1257 aaPredicted RBP6.34□□□□□ -1.39
VPS50-202ENST00000305866 APOBRQ0VD83 1088 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 FCHSD1Q86WN1 690 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 AOPEPQ8N6M6 819 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 MSANTD4Q8NCY6 345 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 PODXL2Q9NZ53 605 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 STK36Q9NRP7 1315 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 YEATS4O95619 227 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 EIF2S2P20042 333 aaKnown RBP6.34□□□□□ -1.39
VPS50-202ENST00000305866 FGFR2P21802 821 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 ETF1P62495 437 aaKnown RBP6.34□□□□□ -1.39
VPS50-202ENST00000305866 FMR1Q06787 632 aaKnown RBP eCLIP6.34□□□□□ -1.394e-6■■■■□ 21.6
VPS50-202ENST00000305866 TAF3Q5VWG9 929 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 BRINP3Q76B58 766 aa6.34□□□□□ -1.39
VPS50-202ENST00000305866 HNRNPLLQ8WVV9 542 aaKnown RBP6.34□□□□□ -1.39
VPS50-202ENST00000305866 LTBP4Q8N2S1 1624 aa6.34□□□□□ -1.4
VPS50-202ENST00000305866 PDS5AQ29RF7 1337 aaKnown RBP6.34□□□□□ -1.4
VPS50-202ENST00000305866 QSER1Q2KHR3 1735 aa6.34□□□□□ -1.4
VPS50-202ENST00000305866 ERVV-1B6SEH8 477 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 RNF225M0QZC1 329 aaPredicted RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 PTMAP06454 111 aaKnown RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 CMA1P23946 247 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 NPY5RQ15761 445 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 FBXO18Q8NFZ0 1043 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 RAPGEF4Q8WZA2 1011 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 SYTL4Q96C24 671 aaPredicted RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 RIPOR2Q9Y4F9 1068 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 A0A087X0B3 334 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 PRPF6O94906 941 aaKnown RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 NT5C2P49902 561 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 SCARF1Q14162 830 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 NR1I3Q14994 352 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 BEND6Q5SZJ8 279 aaPredicted RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 CCDC112Q8NEF3 446 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 LRRC2Q9BYS8 371 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 MRPL44Q9H9J2 332 aaKnown RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 ZNFX1Q9P2E3 1918 aaKnown RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 RNF113AO15541 343 aaKnown RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 SEC31AO94979 1220 aaKnown RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 ARHGAP25P42331 645 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 GRIN1Q05586 938 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 RAD51AP2Q09MP3 1159 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 SLC39A14Q15043 492 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 TTLL5Q6EMB2 1281 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 TOGARAM2Q6ZUX3 1019 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 MYD88Q99836 296 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 TRIM5Q9C035 493 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 CWC25Q9NXE8 425 aaPredicted RBP6.33□□□□□ -1.4
VPS50-202ENST00000305866 C10orf71Q711Q0 1435 aa6.33□□□□□ -1.4
VPS50-202ENST00000305866 A0A1B0GVL5 298 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 GOLGA6L6A8MZA4 724 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 FOXN1O15353 648 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 FGRP09769 529 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 PFKFB1P16118 471 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 DPYDQ12882 1025 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 CUL4BQ13620 913 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 DHX8Q14562 1220 aaKnown RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 CCDC158Q5M9N0 1113 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 ZBTB38Q8NAP3 1195 aaPredicted RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS50-202ENST00000305866 RASSF10A6NK89 507 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 WNT7AO00755 349 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 ACTN4O43707 911 aaKnown RBP6.32□□□□□ -1.4
VPS50-202ENST00000305866 PPP6R2O75170 966 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 GOLGA8FQ08AF8 430 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 GOLGA8DPQ0D2H9 430 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 STK3Q13188 491 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 MORC3Q14149 939 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 PTPN14Q15678 1187 aa6.32□□□□□ -1.4
VPS50-202ENST00000305866 CDKAL1Q5VV42 579 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms