RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 MS4A4AQ96JQ5 239 aa17.42■□□□□ 0.38
TPM1-202ENST00000288398 PTPN18Q99952 460 aa17.42■□□□□ 0.38
TPM1-202ENST00000288398 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
TPM1-202ENST00000288398 TCP10Q12799 353 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 DIXDC1Q155Q3 683 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
TPM1-202ENST00000288398 SLF2Q8IX21 1173 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
TPM1-202ENST00000288398 MEIS3Q99687 375 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
TPM1-202ENST00000288398 AKAP2Q9Y2D5 859 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 DAGLAQ9Y4D2 1042 aa17.41■□□□□ 0.38
TPM1-202ENST00000288398 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 PRDX5P30044 214 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 PPIL2Q13356 520 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 MIGA2Q7L4E1 593 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 SNCAIPQ9Y6H5 919 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 LAMB1P07942 1786 aa17.4■□□□□ 0.38
TPM1-202ENST00000288398 PHKA1P46020 1223 aa17.39■□□□□ 0.37
TPM1-202ENST00000288398 GORABQ5T7V8 394 aa17.39■□□□□ 0.37
TPM1-202ENST00000288398 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
TPM1-202ENST00000288398 CDC42EP5Q6NZY7 148 aa17.39■□□□□ 0.37
TPM1-202ENST00000288398 FRAT1Q92837 279 aaPredicted RBP17.39■□□□□ 0.37
TPM1-202ENST00000288398 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
TPM1-202ENST00000288398 SALL1Q9NSC2 1324 aa17.39■□□□□ 0.37
TPM1-202ENST00000288398 PPATQ06203 517 aa17.38■□□□□ 0.37
TPM1-202ENST00000288398 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
TPM1-202ENST00000288398 PRPF38BQ5VTL8 546 aaKnown RBP17.38■□□□□ 0.37
TPM1-202ENST00000288398 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
TPM1-202ENST00000288398 NBPF11Q86T75 865 aa17.38■□□□□ 0.37
TPM1-202ENST00000288398 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
TPM1-202ENST00000288398 FAM43AQ8N2R8 423 aa17.38■□□□□ 0.37
TPM1-202ENST00000288398 ZCCHC17Q9NP64 241 aaKnown RBP17.38■□□□□ 0.37
TPM1-202ENST00000288398 IRF6O14896 467 aa17.37■□□□□ 0.37
TPM1-202ENST00000288398 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
TPM1-202ENST00000288398 TMEM106CQ9BVX2 250 aa17.37■□□□□ 0.37
TPM1-202ENST00000288398 PDE4DIPQ5VU43 2346 aa17.36■□□□□ 0.37
TPM1-202ENST00000288398 GNAI2P04899 355 aa17.36■□□□□ 0.37
TPM1-202ENST00000288398 ADORA1P30542 326 aa17.36■□□□□ 0.37
TPM1-202ENST00000288398 INPP5BP32019 993 aa17.36■□□□□ 0.37
TPM1-202ENST00000288398 SLC9C1Q4G0N8 1177 aa17.36■□□□□ 0.37
TPM1-202ENST00000288398 TNRC18O15417 2968 aaPredicted RBP17.35■□□□□ 0.37
TPM1-202ENST00000288398 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 BTBD19C9JJ37 291 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 TLR2O60603 784 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 TIMM10P62072 90 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 TFCP2Q12800 502 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 NFIAQ12857 509 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.35■□□□□ 0.37
TPM1-202ENST00000288398 PICK1Q9NRD5 415 aa17.35■□□□□ 0.37
TPM1-202ENST00000288398 SLC34A2O95436 690 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 RGS3P49796 1198 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
TPM1-202ENST00000288398 RASGRF1Q13972 1273 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 PDS5AQ29RF7 1337 aaKnown RBP17.34■□□□□ 0.37
TPM1-202ENST00000288398 AK9Q5TCS8 1911 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 XAGE2Q96GT9 111 aa17.34■□□□□ 0.37
TPM1-202ENST00000288398 ENTPD3O75355 529 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 GNRH1P01148 92 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 GSTO1P78417 241 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 MTX1Q13505 466 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 ANKRD23Q86SG2 305 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 ARMC5Q96C12 935 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
TPM1-202ENST00000288398 PDHXO00330 501 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 LDHCP07864 332 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 TRIM27P14373 513 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 BTDP43251 543 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 LACTBP83111 547 aaPredicted RBP17.32■□□□□ 0.36
TPM1-202ENST00000288398 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
TPM1-202ENST00000288398 PICALMQ13492 652 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 SLC4A8Q2Y0W8 1093 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 NOL9Q5SY16 702 aaKnown RBP17.32■□□□□ 0.36
TPM1-202ENST00000288398 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
TPM1-202ENST00000288398 GAKO14976 1311 aa17.31■□□□□ 0.36
TPM1-202ENST00000288398 ZBTB22O15209 634 aa17.31■□□□□ 0.36
TPM1-202ENST00000288398 HOXD10P28358 340 aa17.31■□□□□ 0.36
TPM1-202ENST00000288398 PRMT2P55345 433 aa17.31■□□□□ 0.36
TPM1-202ENST00000288398 PARK7Q99497 189 aaKnown RBP17.31■□□□□ 0.36
TPM1-202ENST00000288398 NOL10Q9BSC4 688 aaKnown RBP17.31■□□□□ 0.36
TPM1-202ENST00000288398 PTCH2Q9Y6C5 1203 aa17.31■□□□□ 0.36
TPM1-202ENST00000288398 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 POTEFA5A3E0 1075 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 BCAR3O75815 825 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 ECM2O94769 699 aaPredicted RBP17.3■□□□□ 0.36
TPM1-202ENST00000288398 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
TPM1-202ENST00000288398 SCYL3Q8IZE3 742 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
TPM1-202ENST00000288398 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms