RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 GREB1Q4ZG55 1949 aa4.42□□□□□ -1.7
PHTF2-202ENST00000275575 EXOSC9Q06265 439 aaKnown RBP4.42□□□□□ -1.7
PHTF2-202ENST00000275575 NFIAQ12857 509 aa4.42□□□□□ -1.7
PHTF2-202ENST00000275575 MORN1Q5T089 497 aa4.42□□□□□ -1.7
PHTF2-202ENST00000275575 ANGEL2Q5VTE6 544 aaKnown RBP4.42□□□□□ -1.7
PHTF2-202ENST00000275575 NBPF3Q9H094 633 aa4.42□□□□□ -1.7
PHTF2-202ENST00000275575 USP17L3A6NCW0 530 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 USP17L4A6NCW7 530 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 F6X3S4 739 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 ADCY6O43306 1168 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 GPNMBQ14956 572 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 WASHC4Q2M389 1173 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 USP17L1Q7RTZ2 530 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 TTC5Q8N0Z6 440 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 CRIPAKQ8N1N5 446 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 CWC25Q9NXE8 425 aaPredicted RBP4.41□□□□□ -1.7
PHTF2-202ENST00000275575 FBXO3Q9UK99 471 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 SUGT1Q9Y2Z0 365 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 BDP1A6H8Y1 2624 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 GPR75-ASB3A0A0A6YYF3 556 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 PNMA6EA0A0J9YXQ4 647 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 PDE8BO95263 885 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 CHGBP05060 677 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 GNAI1P63096 354 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 HDGFL1Q5TGJ6 251 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 SNRKQ9NRH2 765 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 BMP8BP34820 402 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 TTC3P53804 2025 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 DOK7Q18PE1 504 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 TWISTNBQ3B726 338 aaPredicted RBP4.41□□□□□ -1.7
PHTF2-202ENST00000275575 REM2Q8IYK8 340 aaPredicted RBP4.41□□□□□ -1.7
PHTF2-202ENST00000275575 TRPV1Q8NER1 839 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 NLRP3Q96P20 1036 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 MYD88Q99836 296 aa4.41□□□□□ -1.7
PHTF2-202ENST00000275575 DDTLA6NHG4 134 aaPredicted RBP4.4□□□□□ -1.7
PHTF2-202ENST00000275575 GRM8O00222 908 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 U2SURPO15042 1029 aaKnown RBP4.4□□□□□ -1.7
PHTF2-202ENST00000275575 MAP2K1Q02750 393 aaPredicted RBP4.4□□□□□ -1.7
PHTF2-202ENST00000275575 CRHR2Q13324 411 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 VGLL4Q14135 290 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 UBE4AQ14139 1066 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 ZNF70Q9UC06 446 aaPredicted RBP4.4□□□□□ -1.7
PHTF2-202ENST00000275575 MYO3BQ8WXR4 1341 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 RBAK-RBAKDNI3L0D1 243 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 CA12O43570 354 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 PPP4CP60510 307 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 COL19A1Q14993 1142 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 DNAAF4Q8WXU2 420 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 TRIM47Q96LD4 638 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 C12orf42Q96LP6 360 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 FLRT1Q9NZU1 646 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 PCDH10Q9P2E7 1040 aa4.4□□□□□ -1.7
PHTF2-202ENST00000275575 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.4□□□□□ -1.7
PHTF2-202ENST00000275575 NYNRINQ9P2P1 1898 aaKnown RBP4.4□□□□□ -1.7
PHTF2-202ENST00000275575 POTEB2H3BUK9 544 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 DPP8Q6V1X1 898 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-202ENST00000275575 KLHDC4Q8TBB5 520 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 GDF15Q99988 308 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 MORF4L1Q9UBU8 362 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 PPIP5K2O43314 1243 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 CDC42EP5Q6NZY7 148 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 ZNF622Q969S3 477 aaKnown RBP eCLIP4.4□□□□□ -1.714e-10■□□□□ 8.7
PHTF2-202ENST00000275575 NSUN4Q96CB9 384 aaKnown RBP4.4□□□□□ -1.71
PHTF2-202ENST00000275575 GBA2Q9HCG7 927 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-202ENST00000275575 RTN4Q9NQC3 1192 aaKnown RBP4.4□□□□□ -1.71
PHTF2-202ENST00000275575 VWA8A3KMH1 1905 aa4.4□□□□□ -1.71
PHTF2-202ENST00000275575 FRAT2O75474 233 aaPredicted RBP4.39□□□□□ -1.71
PHTF2-202ENST00000275575 CELF2O95319 508 aaKnown RBP4.39□□□□□ -1.71
PHTF2-202ENST00000275575 MCAMP43121 646 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 COL9A3Q14050 684 aaPredicted RBP4.39□□□□□ -1.71
PHTF2-202ENST00000275575 C1orf53Q5VUE5 145 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 ZNF292O60281 2723 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 GPR25O00155 361 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 ADORA1P30542 326 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 IRF5Q13568 498 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 TBC1D10BQ4KMP7 808 aaPredicted RBP4.39□□□□□ -1.71
PHTF2-202ENST00000275575 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 SUPT20HQ8NEM7 779 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 TXNRD2Q9NNW7 524 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 PAPLNO95428 1278 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 GHRHRQ02643 423 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 DDX10Q13206 875 aaKnown RBP4.39□□□□□ -1.71
PHTF2-202ENST00000275575 DGKZQ13574 1117 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
PHTF2-202ENST00000275575 ITGB8P26012 769 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 NOGQ13253 232 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 DEFB129Q9H1M3 183 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 MYPNQ86TC9 1320 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 MROH5Q6ZUA9 1318 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 DNAJC25-GNG10A0A024R161 153 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 BTBD19C9JJ37 291 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 TAF5LO75529 589 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 KCNA4P22459 653 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 HOXA7P31268 230 aaPredicted RBP4.38□□□□□ -1.71
PHTF2-202ENST00000275575 HOXC8P31273 242 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 TRAF7Q6Q0C0 670 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 DZIP1LQ8IYY4 767 aaKnown RBP4.38□□□□□ -1.71
PHTF2-202ENST00000275575 GPR108Q9NPR9 543 aa4.38□□□□□ -1.71
PHTF2-202ENST00000275575 TLR7Q9NYK1 1049 aaKnown RBP4.38□□□□□ -1.71
PHTF2-202ENST00000275575 TRMT112Q9UI30 125 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms