RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 VPS37DQ86XT2 251 aa23.65■■□□□ 1.38
UBE2F-201ENST00000272930 MIGA1Q8NAN2 632 aa23.65■■□□□ 1.38
UBE2F-201ENST00000272930 STAG1Q8WVM7 1258 aa23.65■■□□□ 1.38
UBE2F-201ENST00000272930 BCL11BQ9C0K0 894 aaPredicted RBP23.65■■□□□ 1.38
UBE2F-201ENST00000272930 ORC3Q9UBD5 711 aaPredicted RBP23.65■■□□□ 1.38
UBE2F-201ENST00000272930 TACC3Q9Y6A5 838 aa23.65■■□□□ 1.38
UBE2F-201ENST00000272930 CPLX1O14810 134 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 HSPA1LP34931 641 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 LIFRP42702 1097 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 TDO2P48775 406 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 GIMAP6Q6P9H5 292 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 KRT23Q9C075 422 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 LY9Q9HBG7 655 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 RAI14Q9P0K7 980 aa23.64■■□□□ 1.38
UBE2F-201ENST00000272930 UVSSAQ2YD98 709 aa23.64■■□□□ 1.37
UBE2F-201ENST00000272930 ILDR1Q86SU0 546 aaPredicted RBP23.64■■□□□ 1.37
UBE2F-201ENST00000272930 ZSWIM5Q9P217 1185 aa23.64■■□□□ 1.37
UBE2F-201ENST00000272930 RCOR1Q9UKL0 485 aa23.64■■□□□ 1.37
UBE2F-201ENST00000272930 ZBTB22O15209 634 aa23.63■■□□□ 1.37
UBE2F-201ENST00000272930 GUCY1B3Q02153 619 aa23.63■■□□□ 1.37
UBE2F-201ENST00000272930 FAM196AQ6ZSG2 479 aa23.63■■□□□ 1.37
UBE2F-201ENST00000272930 RAB11FIP4Q86YS3 637 aa23.63■■□□□ 1.37
UBE2F-201ENST00000272930 INCENPQ9NQS7 918 aa23.63■■□□□ 1.37
UBE2F-201ENST00000272930 CCDC88AQ3V6T2 1871 aa23.63■■□□□ 1.37
UBE2F-201ENST00000272930 METAP2P50579 478 aaKnown RBP eCLIP23.62■■□□□ 1.37
UBE2F-201ENST00000272930 MFSD6Q6ZSS7 791 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 CCDC24Q8N4L8 307 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 FBXO18Q8NFZ0 1043 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 C8orf76Q96K31 380 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 ZNF396Q96N95 335 aaPredicted RBP23.62■■□□□ 1.37
UBE2F-201ENST00000272930 RIOK1Q9BRS2 568 aaKnown RBP23.62■■□□□ 1.37
UBE2F-201ENST00000272930 NUP62CLQ9H1M0 184 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 MAST2Q6P0Q8 1798 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 BAZ2AQ9UIF9 1905 aaKnown RBP23.62■■□□□ 1.37
UBE2F-201ENST00000272930 MAGEB6P1A0A0J9YX57 407 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 ADRA2BP18089 450 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 KLRK1P26718 216 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 SENP2Q9HC62 589 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 LRRC4BQ9NT99 713 aa23.62■■□□□ 1.37
UBE2F-201ENST00000272930 DDX19AQ9NUU7 478 aaKnown RBP23.62■■□□□ 1.37
UBE2F-201ENST00000272930 ESPNB1AK53 854 aa23.61■■□□□ 1.37
UBE2F-201ENST00000272930 KDM4AO75164 1064 aa23.61■■□□□ 1.37
UBE2F-201ENST00000272930 TMEM67Q5HYA8 995 aa23.61■■□□□ 1.37
UBE2F-201ENST00000272930 USP28Q96RU2 1077 aa23.61■■□□□ 1.37
UBE2F-201ENST00000272930 MTA3Q9BTC8 594 aa23.61■■□□□ 1.37
UBE2F-201ENST00000272930 DACT1Q9NYF0 836 aa23.61■■□□□ 1.37
UBE2F-201ENST00000272930 NFIXQ14938 502 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 NID2Q14112 1375 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 ZBTB43O43298 467 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 CDKL5O76039 1030 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 HS1BP3Q53T59 392 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 ZNF384Q8TF68 577 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 ANAPC4Q9UJX5 808 aa23.6■■□□□ 1.37
UBE2F-201ENST00000272930 KIAA1551Q9HCM1 1747 aa23.59■■□□□ 1.37
UBE2F-201ENST00000272930 IRS2Q9Y4H2 1338 aa23.59■■□□□ 1.37
UBE2F-201ENST00000272930 HIBADHP31937 336 aaKnown RBP23.59■■□□□ 1.37
UBE2F-201ENST00000272930 RBM43Q6ZSC3 357 aaKnown RBP23.59■■□□□ 1.37
UBE2F-201ENST00000272930 RNF41Q9H4P4 317 aaPredicted RBP23.59■■□□□ 1.37
UBE2F-201ENST00000272930 IFIT3O14879 490 aaKnown RBP23.59■■□□□ 1.37
UBE2F-201ENST00000272930 CDC27P30260 824 aa23.59■■□□□ 1.37
UBE2F-201ENST00000272930 PPARAQ07869 468 aa23.59■■□□□ 1.37
UBE2F-201ENST00000272930 MAP3K11Q16584 847 aa23.59■■□□□ 1.37
UBE2F-201ENST00000272930 BICD2Q8TD16 824 aa23.59■■□□□ 1.37
UBE2F-201ENST00000272930 BRWD3Q6RI45 1802 aa23.58■■□□□ 1.37
UBE2F-201ENST00000272930 CPLX2Q6PUV4 134 aaKnown RBP23.58■■□□□ 1.37
UBE2F-201ENST00000272930 SDR42E1Q8WUS8 393 aa23.58■■□□□ 1.37
UBE2F-201ENST00000272930 FTOQ9C0B1 505 aaKnown RBP eCLIP23.58■■□□□ 1.37
UBE2F-201ENST00000272930 CLSTN2Q9H4D0 955 aa23.58■■□□□ 1.37
UBE2F-201ENST00000272930 MYH2Q9UKX2 1941 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 CEBPZQ03701 1054 aaKnown RBP23.57■■□□□ 1.36
UBE2F-201ENST00000272930 NTRK3Q16288 839 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 OTUD7BQ6GQQ9 843 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 NFXL1Q6ZNB6 911 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 MICU3Q86XE3 530 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 FAM217BQ9NTX9 383 aaPredicted RBP23.57■■□□□ 1.36
UBE2F-201ENST00000272930 NR1I2O75469 434 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 CCDC192P0DO97 292 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 BRAPQ7Z569 592 aa23.57■■□□□ 1.36
UBE2F-201ENST00000272930 NSUN4Q96CB9 384 aaKnown RBP23.57■■□□□ 1.36
UBE2F-201ENST00000272930 NPHP1O15259 732 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 RXRAP19793 462 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 CLCN1P35523 988 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 CNBD1Q8NA66 436 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 BRIP1Q9BX63 1249 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 TNMDQ9H2S6 317 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 RTEL1Q9NZ71 1219 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 TFCP2L1Q9NZI6 479 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 SLC12A7Q9Y666 1083 aa23.56■■□□□ 1.36
UBE2F-201ENST00000272930 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.55■■□□□ 1.36
UBE2F-201ENST00000272930 GOLGA8AA7E2F4 631 aa23.55■■□□□ 1.36
UBE2F-201ENST00000272930 GRAPQ13588 217 aa23.55■■□□□ 1.36
UBE2F-201ENST00000272930 SART3Q15020 963 aaKnown RBP23.55■■□□□ 1.36
UBE2F-201ENST00000272930 TMED8Q6PL24 325 aaPredicted RBP23.55■■□□□ 1.36
UBE2F-201ENST00000272930 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
UBE2F-201ENST00000272930 LAMB1P07942 1786 aa23.55■■□□□ 1.36
UBE2F-201ENST00000272930 DUOX1Q9NRD9 1551 aa23.55■■□□□ 1.36
UBE2F-201ENST00000272930 CCDC69A6NI79 296 aa23.55■■□□□ 1.36
UBE2F-201ENST00000272930 STK36Q9NRP7 1315 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 DYNLL1P63167 89 aaKnown RBP23.54■■□□□ 1.36
UBE2F-201ENST00000272930 KIF23Q02241 960 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 291.9 ms