RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SNX21Q969T3 373 aa27.03■■□□□ 1.92
UFD1-201ENST00000263202 TM6SF1Q9BZW5 370 aa27.03■■□□□ 1.92
UFD1-201ENST00000263202 GPR75-ASB3A0A0A6YYF3 556 aa27.02■■□□□ 1.92
UFD1-201ENST00000263202 BAG3O95817 575 aa27.02■■□□□ 1.92
UFD1-201ENST00000263202 IMMTQ16891 758 aaKnown RBP27.02■■□□□ 1.92
UFD1-201ENST00000263202 JAKMIP1Q96N16 626 aaKnown RBP27.02■■□□□ 1.92
UFD1-201ENST00000263202 NACAP1Q9BZK3 213 aa27.02■■□□□ 1.92
UFD1-201ENST00000263202 NEK4P51957 841 aa27.02■■□□□ 1.92
UFD1-201ENST00000263202 NOL10Q9BSC4 688 aaKnown RBP27.02■■□□□ 1.92
UFD1-201ENST00000263202 TBC1D2Q9BYX2 928 aa27.02■■□□□ 1.92
UFD1-201ENST00000263202 UPF3BQ9BZI7 483 aaKnown RBP27.02■■□□□ 1.92
UFD1-201ENST00000263202 CRNKL1Q9BZJ0 848 aaKnown RBP27.02■■□□□ 1.92
UFD1-201ENST00000263202 NAPBQ9H115 298 aa27.02■■□□□ 1.92
UFD1-201ENST00000263202 CD2BP2O95400 341 aaKnown RBP27.01■■□□□ 1.91
UFD1-201ENST00000263202 BTDP43251 543 aa27.01■■□□□ 1.91
UFD1-201ENST00000263202 KRT32Q14532 448 aa27.01■■□□□ 1.91
UFD1-201ENST00000263202 DAGLAQ9Y4D2 1042 aa27.01■■□□□ 1.91
UFD1-201ENST00000263202 RAD17O75943 681 aa27■■□□□ 1.91
UFD1-201ENST00000263202 CASTP20810 708 aaKnown RBP27■■□□□ 1.91
UFD1-201ENST00000263202 PRELPP51888 382 aa27■■□□□ 1.91
UFD1-201ENST00000263202 BECN1Q14457 450 aa27■■□□□ 1.91
UFD1-201ENST00000263202 KIAA0825Q8IV33 1275 aa27■■□□□ 1.91
UFD1-201ENST00000263202 SH3RF3Q8TEJ3 882 aaPredicted RBP27■■□□□ 1.91
UFD1-201ENST00000263202 ZSWIM6Q9HCJ5 1215 aa27■■□□□ 1.91
UFD1-201ENST00000263202 FOCADQ5VW36 1801 aa27■■□□□ 1.91
UFD1-201ENST00000263202 ZNF213O14771 459 aa27■■□□□ 1.91
UFD1-201ENST00000263202 VIL1P09327 827 aaKnown RBP27■■□□□ 1.91
UFD1-201ENST00000263202 TDO2P48775 406 aa27■■□□□ 1.91
UFD1-201ENST00000263202 SCNN1DP51172 638 aa27■■□□□ 1.91
UFD1-201ENST00000263202 HAND2P61296 217 aa27■■□□□ 1.91
UFD1-201ENST00000263202 STOX1Q6ZVD7 989 aa27■■□□□ 1.91
UFD1-201ENST00000263202 CERS3Q8IU89 383 aa27■■□□□ 1.91
UFD1-201ENST00000263202 JDP2Q8WYK2 163 aa27■■□□□ 1.91
UFD1-201ENST00000263202 PSMD14O00487 310 aa26.99■■□□□ 1.91
UFD1-201ENST00000263202 ST18O60284 1047 aa26.99■■□□□ 1.91
UFD1-201ENST00000263202 PSMA5P28066 241 aa26.99■■□□□ 1.91
UFD1-201ENST00000263202 GIMAP6Q6P9H5 292 aa26.99■■□□□ 1.91
UFD1-201ENST00000263202 HHIPL2Q6UWX4 724 aa26.99■■□□□ 1.91
UFD1-201ENST00000263202 DICER1Q9UPY3 1922 aaKnown RBP26.98■■□□□ 1.91
UFD1-201ENST00000263202 ECM29Q5VYK3 1845 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 RSBN1LQ6PCB5 846 aaPredicted RBP26.98■■□□□ 1.91
UFD1-201ENST00000263202 MRIQ9BWK5 157 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 SBF1O95248 1867 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 NAV1Q8NEY1 1877 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 LAMB1P07942 1786 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 MYO3BQ8WXR4 1341 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 TIAM2Q8IVF5 1701 aa26.98■■□□□ 1.91
UFD1-201ENST00000263202 E7EWF7 191 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 CPA1P15085 419 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 IL27Q8NEV9 243 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 TEKT1Q969V4 418 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 NBPF3Q9H094 633 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 ATP8A2Q9NTI2 1148 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 HDLBPQ00341 1268 aaKnown RBP26.97■■□□□ 1.91
UFD1-201ENST00000263202 COL9A3Q14050 684 aaPredicted RBP26.97■■□□□ 1.91
UFD1-201ENST00000263202 RUFY3Q7L099 469 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 HSCBQ8IWL3 235 aa26.97■■□□□ 1.91
UFD1-201ENST00000263202 PLCG2P16885 1265 aa26.96■■□□□ 1.91
UFD1-201ENST00000263202 CRKP46108 304 aa26.96■■□□□ 1.91
UFD1-201ENST00000263202 RHBDL3P58872 404 aa26.96■■□□□ 1.91
UFD1-201ENST00000263202 CXCL9Q07325 125 aa26.96■■□□□ 1.91
UFD1-201ENST00000263202 NEK1Q96PY6 1258 aa26.96■■□□□ 1.91
UFD1-201ENST00000263202 DCP1AQ9NPI6 582 aaPredicted RBP26.96■■□□□ 1.91
UFD1-201ENST00000263202 CYP46A1Q9Y6A2 500 aa26.96■■□□□ 1.91
UFD1-201ENST00000263202 SLC4A3P48751 1232 aa26.95■■□□□ 1.91
UFD1-201ENST00000263202 ARHGAP27Q6ZUM4 889 aa26.95■■□□□ 1.91
UFD1-201ENST00000263202 TTC14Q96N46 770 aa26.95■■□□□ 1.91
UFD1-201ENST00000263202 GMLQ99445 158 aa26.95■■□□□ 1.91
UFD1-201ENST00000263202 BLOC1S2Q6QNY1 142 aa26.95■■□□□ 1.9
UFD1-201ENST00000263202 SOCS7O14512 581 aa26.94■■□□□ 1.9
UFD1-201ENST00000263202 ZDHHC15Q96MV8 337 aa26.94■■□□□ 1.9
UFD1-201ENST00000263202 MKRN1Q9UHC7 482 aaKnown RBP26.94■■□□□ 1.9
UFD1-201ENST00000263202 DDX60LQ5H9U9 1706 aaKnown RBP26.93■■□□□ 1.9
UFD1-201ENST00000263202 USP5P45974 858 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 CIAPIN1Q6FI81 312 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 TBC1D10CQ8IV04 446 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 SERPINA10Q9UK55 444 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 RPS6KB1P23443 525 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 CTR9Q6PD62 1173 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 TEX11Q8IYF3 940 aa26.93■■□□□ 1.9
UFD1-201ENST00000263202 YBX3P16989 372 aaKnown RBP eCLIP26.92■■□□□ 1.98e-15■□□□□ 11
UFD1-201ENST00000263202 APOBEC3HQ6NTF7 200 aaKnown RBP26.92■■□□□ 1.9
UFD1-201ENST00000263202 TGFBRAP1Q8WUH2 860 aa26.92■■□□□ 1.9
UFD1-201ENST00000263202 PDRG1Q9NUG6 133 aa26.92■■□□□ 1.9
UFD1-201ENST00000263202 ZBTB12Q9Y330 459 aaPredicted RBP26.92■■□□□ 1.9
UFD1-201ENST00000263202 MYH1P12882 1939 aa26.92■■□□□ 1.9
UFD1-201ENST00000263202 K7ELQ4 463 aaPredicted RBP26.91■■□□□ 1.9
UFD1-201ENST00000263202 FZD9O00144 591 aa26.91■■□□□ 1.9
UFD1-201ENST00000263202 HMGB1P09429 215 aaKnown RBP26.91■■□□□ 1.9
UFD1-201ENST00000263202 CTDSPL2Q05D32 466 aa26.91■■□□□ 1.9
UFD1-201ENST00000263202 PPARAQ07869 468 aa26.91■■□□□ 1.9
UFD1-201ENST00000263202 AGBL3Q8NEM8 1001 aa26.91■■□□□ 1.9
UFD1-201ENST00000263202 DAXXQ9UER7 740 aaPredicted RBP26.91■■□□□ 1.9
UFD1-201ENST00000263202 ANAPC4Q9UJX5 808 aa26.91■■□□□ 1.9
UFD1-201ENST00000263202 USP17L12C9JPN9 530 aa26.9■■□□□ 1.9
UFD1-201ENST00000263202 USP17L21D6R901 530 aa26.9■■□□□ 1.9
UFD1-201ENST00000263202 TNIP1Q15025 636 aa26.9■■□□□ 1.9
UFD1-201ENST00000263202 PCDHAC2Q9Y5I4 1007 aa26.9■■□□□ 1.9
UFD1-201ENST00000263202 MINDY4BA8MYZ0 360 aa26.9■■□□□ 1.9
UFD1-201ENST00000263202 SBK1Q52WX2 424 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms