RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CCDC196A0A1B0GTZ2 297 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 PRDM1O75626 825 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 SLC5A1P13866 664 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 IL2RBP14784 551 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 RFX5P48382 616 aaPredicted RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 EVCP57679 992 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 HSP90B2PQ58FF3 399 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 DHX40Q8IX18 779 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 FMR1NBQ8N0W7 255 aaPredicted RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 PPP1R13BQ96KQ4 1090 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 BAG1Q99933 345 aaPredicted RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 PUF60Q9UHX1 559 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 DLG5Q8TDM6 1919 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 ANKARQ7Z5J8 1434 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 CMA1P23946 247 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 IGHMBP2P38935 993 aaKnown RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 KIF23Q02241 960 aaPredicted RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 TCIRG1Q13488 830 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 MCM6Q14566 821 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 ATG9AQ7Z3C6 839 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 CADPS2Q86UW7 1296 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 GRAMD1CQ8IYS0 662 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 GREM2Q9H772 168 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 A0A1W2PQ27 194 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 A0A1W2PQ64 194 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 A0A1W2PQD8 194 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 H7C1W4 665 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 KIF5CO60282 957 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 ZSCAN20P17040 1043 aaPredicted RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 CYP7A1P22680 504 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 PHKA1P46020 1223 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 ETF1P62495 437 aaKnown RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 IMPACTQ9P2X3 320 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 DENND2AQ9ULE3 1009 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 CEP131Q9UPN4 1083 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 MAPK8IP1Q9UQF2 711 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP44-201ENST00000258499 AGLP35573 1532 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 KIF28PB7ZC32 967 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 N4BP3O15049 544 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 COBLO75128 1261 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 FDPSP14324 419 aaKnown RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 CDC25BP30305 580 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 CCT6AP40227 531 aaKnown RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 FOXO4P98177 505 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 EXOSC10Q01780 885 aaKnown RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 KMT5BQ4FZB7 885 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 APOA5Q6Q788 366 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 SARM1Q6SZW1 724 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 CAGE1Q8TC20 777 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 CCDC102AQ96A19 550 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 NUP88Q99567 741 aaPredicted RBP5.43□□□□□ -1.54
USP44-201ENST00000258499 POLR3EQ9NVU0 708 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 SERTAD1Q9UHV2 236 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 ASAP1Q9ULH1 1129 aa5.43□□□□□ -1.54
USP44-201ENST00000258499 ITSN1Q15811 1721 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 PXDNQ92626 1479 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 TCHHQ07283 1943 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 RAD21O60216 631 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 KIF20AO95235 890 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 PDE6AP16499 860 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 HSPA2P54652 639 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 SLC39A14Q15043 492 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 RABL6Q3YEC7 729 aaPredicted RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 IL17RAQ96F46 866 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 WWC3Q9ULE0 1092 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 JAG2Q9Y219 1238 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 PCDH11XQ9BZA7 1347 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 PCDH11YQ9BZA8 1340 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 DIP2AQ14689 1571 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 RICTORQ6R327 1708 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 TRIM75PA6NK02 468 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 TMEM232C9JQI7 657 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 MARCH6O60337 910 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 UQCRFS1P1P0C7P4 283 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 TXLNAP40222 546 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 RBM6P78332 1123 aaKnown RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 CCZ1BP86790 482 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 CCZ1P86791 482 aaPredicted RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 NR5A1Q13285 461 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 ZNF174Q15697 407 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 LONRF3Q496Y0 759 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 JAKMIP3Q5VZ66 844 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 IQCA1Q86XH1 822 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 PIP4P2Q8N4L2 257 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 ALDH8A1Q9H2A2 487 aaPredicted RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 EPC1Q9H2F5 836 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 ARFGAP3Q9NP61 516 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 ST7Q9NRC1 585 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 UTYO14607 1347 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 NPHP4O75161 1426 aaPredicted RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 DIP2BQ9P265 1576 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 VWA3AA6NCI4 1184 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 FOXN1O15353 648 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 PHACTR2O75167 634 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 WDHD1O75717 1129 aaPredicted RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 SEC31AO94979 1220 aaKnown RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 LMAN1P49257 510 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 NAP1L1P55209 391 aaKnown RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 NLRP5P59047 1200 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms