RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 PGBD1Q96JS3 809 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 TOMM22Q9NS69 142 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 MINPP1Q9UNW1 487 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 IQSEC3Q9UPP2 1182 aaPredicted RBP17.65■□□□□ 0.42
DDX49-201ENST00000247003 LY75O60449 1722 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 ERICH2A1L162 156 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 CAMK4Q16566 473 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 CCDC73Q6ZRK6 1079 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 RAB11FIP4Q86YS3 637 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 MIGA1Q8NAN2 632 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 ANKRD2Q9GZV1 360 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 BCL2L12Q9HB09 334 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
DDX49-201ENST00000247003 RCOR1Q9UKL0 485 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.42
DDX49-201ENST00000247003 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.41
DDX49-201ENST00000247003 SEMA3EO15041 775 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 LIFRP42702 1097 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 CTDSPL2Q05D32 466 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 MICU3Q86XE3 530 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 FBXO18Q8NFZ0 1043 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 STAG1Q8WVM7 1258 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
DDX49-201ENST00000247003 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 TAF1LQ8IZX4 1826 aa17.64■□□□□ 0.41
DDX49-201ENST00000247003 TAF1P21675 1872 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 AFF2P51816 1311 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 GOLGA8AA7E2F4 631 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 KDM4AO75164 1064 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
DDX49-201ENST00000247003 SASS6Q6UVJ0 657 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 NR1I2O75469 434 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 ME1P48163 572 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
DDX49-201ENST00000247003 TYRO3Q06418 890 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 TRIM29Q14134 588 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
DDX49-201ENST00000247003 PTF1AQ7RTS3 328 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
DDX49-201ENST00000247003 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
DDX49-201ENST00000247003 CTAGE5O15320 804 aa17.62■□□□□ 0.41
DDX49-201ENST00000247003 PRKAB2O43741 272 aa17.62■□□□□ 0.41
DDX49-201ENST00000247003 RFC4P35249 363 aa17.62■□□□□ 0.41
DDX49-201ENST00000247003 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
DDX49-201ENST00000247003 CCAR1Q8IX12 1150 aaKnown RBP17.62■□□□□ 0.41
DDX49-201ENST00000247003 FAM200AQ8TCP9 573 aa17.62■□□□□ 0.41
DDX49-201ENST00000247003 IGDCC4Q8TDY8 1250 aa17.62■□□□□ 0.41
DDX49-201ENST00000247003 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
DDX49-201ENST00000247003 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 STK38Q15208 465 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 RBM43Q6ZSC3 357 aaKnown RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 CKAP2LQ8IYA6 745 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 KCNG4Q8TDN1 519 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 RTEL1Q9NZ71 1219 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 ZSWIM5Q9P217 1185 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 COL1A1P02452 1464 aaPredicted RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 PDS5AQ29RF7 1337 aaKnown RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 PPARAQ07869 468 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 WTAPQ15007 396 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 TMTC2Q8N394 836 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 WASF1Q92558 559 aa17.61■□□□□ 0.41
DDX49-201ENST00000247003 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
DDX49-201ENST00000247003 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDX49-201ENST00000247003 MAST2Q6P0Q8 1798 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 SBF2Q86WG5 1849 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 YEATS4O95619 227 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 ADCY5O95622 1261 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 RXRAP19793 462 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 PLCB2Q00722 1185 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 ARHGEF1Q92888 912 aaKnown RBP17.6■□□□□ 0.41
DDX49-201ENST00000247003 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
DDX49-201ENST00000247003 POLR3EQ9NVU0 708 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 ZKSCAN5Q9Y2L8 839 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 CACNA1SQ13698 1873 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 ECM29Q5VYK3 1845 aa17.6■□□□□ 0.41
DDX49-201ENST00000247003 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 CAVIN2O95810 425 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 TRAPPC3LQ5T215 181 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 FAM182BQ5T319 152 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 OTUD7BQ6GQQ9 843 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 NID2Q14112 1375 aa17.59■□□□□ 0.41
DDX49-201ENST00000247003 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.41
DDX49-201ENST00000247003 HIBADHP31937 336 aaKnown RBP17.58■□□□□ 0.41
DDX49-201ENST00000247003 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.41
DDX49-201ENST00000247003 FAM160A1Q05DH4 1040 aa17.58■□□□□ 0.41
DDX49-201ENST00000247003 SSRP1Q08945 709 aaKnown RBP17.58■□□□□ 0.41
DDX49-201ENST00000247003 SDR42E1Q8WUS8 393 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms