RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 KCNH2Q12809 1159 aa7.18□□□□□ -1.26
AFP-201ENST00000226359 ELOAQ14241 798 aaKnown RBP7.18□□□□□ -1.26
AFP-201ENST00000226359 SLC10A5Q5PT55 438 aa7.18□□□□□ -1.26
AFP-201ENST00000226359 PPP1R18Q6NYC8 613 aa7.18□□□□□ -1.26
AFP-201ENST00000226359 FAM177A1Q8N128 213 aaPredicted RBP7.18□□□□□ -1.26
AFP-201ENST00000226359 C8orf58Q8NAV2 365 aa7.18□□□□□ -1.26
AFP-201ENST00000226359 CCDC191Q8NCU4 936 aa7.18□□□□□ -1.26
AFP-201ENST00000226359 COL11A2P13942 1736 aaPredicted RBP7.18□□□□□ -1.26
AFP-201ENST00000226359 BRCA1P38398 1863 aaKnown RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 IQCA1LA6NCM1 817 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 ATP5J2-PTCD1G3V325 749 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 IRS4O14654 1257 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 TOMM70O94826 608 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 VEGFAP15692 232 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 IARSP41252 1262 aaKnown RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 TRIM28Q13263 835 aaKnown RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 GRAPQ13588 217 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 CCDC152Q4G0S7 254 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 NIM1KQ8IY84 436 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 SYNE4Q8N205 404 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 DEPDC4Q8N2C3 294 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 GRAPLQ8TC17 118 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 PSMD1Q99460 953 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 ISCA1Q9BUE6 129 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 BCL2L13Q9BXK5 485 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 TCERG1O14776 1098 aaKnown RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 HMGB1P09429 215 aaKnown RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 FSTL1Q12841 308 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 FKBP5Q13451 457 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 DPP8Q6V1X1 898 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 KSR2Q6VAB6 950 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 LARGE2Q8N3Y3 721 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 ZBTB38Q8NAP3 1195 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 SMC1BQ8NDV3 1235 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 NMRK2Q9NPI5 230 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 ZNF277Q9NRM2 450 aaPredicted RBP7.17□□□□□ -1.26
AFP-201ENST00000226359 MAP3K2Q9Y2U5 619 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 ANKRD31Q8N7Z5 1873 aa7.17□□□□□ -1.26
AFP-201ENST00000226359 ABCC4O15439 1325 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 SOWAHDA6NJG2 315 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 PPIP5K2O43314 1243 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 PCCAP05165 728 aaPredicted RBP7.16□□□□□ -1.26
AFP-201ENST00000226359 HNRNPUQ00839 825 aaKnown RBP eCLIP7.16□□□□□ -1.261e-7■□□□□ 8.1
AFP-201ENST00000226359 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 FAM89AQ96GI7 184 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 VPS33BQ9H267 617 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 PHAXQ9H814 394 aaKnown RBP7.16□□□□□ -1.26
AFP-201ENST00000226359 RRAGCQ9HB90 399 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 ATP6V0A2Q9Y487 856 aa7.16□□□□□ -1.26
AFP-201ENST00000226359 USP17L3A6NCW0 530 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 USP17L4A6NCW7 530 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 PDE8AO60658 829 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 HSPA6P17066 643 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 GGCXP38435 758 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 EXOSC9Q06265 439 aaKnown RBP7.15□□□□□ -1.26
AFP-201ENST00000226359 CRTC2Q53ET0 693 aaPredicted RBP7.15□□□□□ -1.26
AFP-201ENST00000226359 USP17L2Q6R6M4 530 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 USP17L1Q7RTZ2 530 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 SP8Q8IXZ3 490 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 MPNDQ8N594 471 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 TSPYL6Q8N831 410 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 C7orf43Q8WVR3 580 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 CDC5LQ99459 802 aaKnown RBP7.15□□□□□ -1.26
AFP-201ENST00000226359 EYA3Q99504 573 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 OCSTAMPQ9BR26 566 aa7.15□□□□□ -1.26
AFP-201ENST00000226359 PI4KAP2A4QPH2 592 aa7.15□□□□□ -1.27
AFP-201ENST00000226359 ARID4AP29374 1257 aaPredicted RBP7.15□□□□□ -1.27
AFP-201ENST00000226359 PI4KAP1Q8N8J0 262 aa7.15□□□□□ -1.27
AFP-201ENST00000226359 DNAAF4Q8WXU2 420 aa7.15□□□□□ -1.27
AFP-201ENST00000226359 ARFGEF2Q9Y6D5 1785 aa7.15□□□□□ -1.27
AFP-201ENST00000226359 CDHR2Q9BYE9 1310 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 NUP98P52948 1817 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 TNRC6CQ9HCJ0 1690 aaKnown RBP7.14□□□□□ -1.27
AFP-201ENST00000226359 ANKRD36CQ5JPF3 1778 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 ZBBXA8MT70 800 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 SKIP12755 728 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 NR1H3Q13133 447 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 SF3B3Q15393 1217 aaKnown RBP7.14□□□□□ -1.27
AFP-201ENST00000226359 LINC01559Q495D7 138 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 ANKRD18AQ8IVF6 992 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 FAM174AQ8TBP5 190 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 HACL1Q9UJ83 578 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 TIAM2Q8IVF5 1701 aa7.14□□□□□ -1.27
AFP-201ENST00000226359 USP17L5A8MUK1 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 IGHMBP2P38935 993 aaKnown RBP7.13□□□□□ -1.27
AFP-201ENST00000226359 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
AFP-201ENST00000226359 CTSWP56202 376 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 PLA2G2CQ5R387 149 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 PNMA1Q8ND90 353 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 GJA3Q9Y6H8 435 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 NEURL1BA8MQ27 555 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L10C9JJH3 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L12C9JPN9 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L21D6R901 530 aa7.13□□□□□ -1.27
AFP-201ENST00000226359 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms