RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Snw1Q9CSN1 536 aaKnown RBP15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Clip2Q9Z0H8 1047 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 AK157302I3ITR1 129 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Wdhd1P59328 1117 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Gm28047Q3US59 414 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Zfp91Q62511 572 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Gys2Q8VCB3 704 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ttc14Q9CSP9 761 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Isca1Q9D924 129 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Kcnh3Q9WVJ0 1095 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Gnat2P50149 354 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Hps3Q91VB4 1002 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Dph6Q9CQ28 267 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ankrd1Q9CR42 319 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Kif13aQ9EQW7 1749 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Slc4a1P04919 929 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Dynll1P63168 89 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Frat1P70339 274 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Eaf2Q91ZD6 262 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Pde3aQ9Z0X4 1141 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Cyp19a1P28649 503 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Irf5P56477 497 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Cyp4f39Q8BGU0 532 aa15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Srp68Q8BMA6 625 aaKnown RBP15.13■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 A0A1W2P7S8 802 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Dync1i1O88485 628 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 MarcksP26645 309 aaKnown RBP15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Cdc5lQ6A068 802 aaKnown RBP15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Pnpla7A2AJ88 1352 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Znf541Q0GGX2 1363 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Pik3c2bE9QAN8 1632 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Gm4340L7N2C4 268 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Psmb7P70195 277 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 RragbQ6NTA4 374 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Tbc1d31Q6NXY1 996 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Luc7l2Q7TNC4 392 aaKnown RBP15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Uri1Q3TLD5 531 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Gng11P61953 73 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Pfkfb1P70266 471 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Tbc1d2bQ3U0J8 965 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Sec62Q8BU14 398 aaKnown RBP15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Q8BZJ8 459 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Mknk2Q8CDB0 459 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ciao1Q99KN2 339 aa15.12■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Vmn2r23E9PXI5 849 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Dok7Q18PE0 504 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 HmcesQ8R1M0 353 aaKnown RBP15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ces1dQ8VCT4 565 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Sos2Q02384 1333 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Phf23Q8BSN5 401 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Mylk2Q8VCR8 613 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Mroh6V9GX81 722 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Cyp2j7A0A140T8U1 504 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Brpf3B2KF05 1204 aaKnown RBP15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 1700013D24RikQ0P521 120 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Usp44Q8C2S0 711 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Nat10Q8K224 1024 aaKnown RBP15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ccdc96Q9CR92 584 aa15.11■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ces1aE9PYP1 563 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Pde11aP0C1Q2 933 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ccdc174Q3U155 467 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Igf2bp2Q5SF07 592 aaKnown RBP15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Tktl2Q9D4D4 627 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Sycp2lA0A0M3U1B0 842 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Rrp1P56183 494 aaKnown RBP15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ncbp1Q3UYV9 790 aaKnown RBP15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ube3bQ9ES34 1070 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 FliiQ9JJ28 1271 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Mdc1Q5PSV9 1707 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Tbc1d4Q8BYJ6 1307 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Tuft1O08970 390 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 MycnP03966 462 aaKnown RBP15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Celf1P28659 486 aaKnown RBP15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 C87499Q3UX49 493 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Madcam1Q61826 405 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Necab1Q8BG18 352 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Tcp11l1Q8BTG3 509 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Xpo4Q9ESJ0 1151 aa15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Msh6P54276 1358 aaKnown RBP15.1■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 InhbeO08717 350 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ctdspl2Q8BG15 465 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 ParnQ8VDG3 624 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Sorbs3Q9R1Z8 733 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Jakmip2D3YXK0 820 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 ArsiQ32KI9 573 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Stn1Q8K2X3 378 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Hps4Q99KG7 671 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Mrpl12Q9DB15 201 aaKnown RBP15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 GmnnO88513 206 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Usp53P15975 1069 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 L1td1Q587J6 782 aaKnown RBP15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Sycp1Q62209 993 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Vps37dQ810I0 261 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 DpydQ8CHR6 1025 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ehd4Q9EQP2 541 aa15.09■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Sept1P42209 366 aa15.08■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Wdr70Q3TWF6 657 aa15.08■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ift74Q8BKE9 600 aa15.08■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Rsph10bE9PYQ0 876 aa15.08■□□□□ 0
Pdgfra-205ENSMUST00000201711 Large2Q5XPT3 690 aa15.08■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms