RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Rgs12Q8CGE9 1381 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Aox3G3X982 1335 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Pde11aP0C1Q2 933 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 NppbP40753 121 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Ccdc51Q3URS9 406 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 HelbQ6NVF4 1074 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Kcnn1Q9EQR3 537 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Adgra3Q7TT36 1310 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Pet2A2AHY8 747 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Fam184aE9PW83 1143 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Metap2O08663 478 aaKnown RBP18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Atp6v0a2P15920 856 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Cep63Q3UPP8 700 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Fez1Q8K0X8 392 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 1700018B08RikQ9DA83 213 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Hmgb2P30681 210 aaKnown RBP18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Spata5Q3UMC0 893 aaKnown RBP18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Cdcp1Q5U462 833 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Olfr118Q7TRJ6 321 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Pdcl3Q8BVF2 240 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 RarsQ9D0I9 660 aaKnown RBP18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Krt85Q9Z2T6 507 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Col4a5Q63ZW6 1691 aa18.54■□□□□ 0.56
Trim39-203ENSMUST00000113706 Gm20425E9Q035 978 aaKnown RBP18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Me1P06801 572 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 SrprbP47758 269 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Bola3Q8CEI1 110 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Prss40A6H6T1 365 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Lins1Q3U1D0 764 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Ccdc82Q6PG04 518 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 9230110C19RikQ8CC70 267 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 MlphQ91V27 590 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Bap1Q99PU7 728 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Mrpl12Q9DB15 201 aaKnown RBP18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Pnpla6Q3TRM4 1355 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Bend4P86174 541 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 TrhQ62361 256 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Pla2g12bQ99P27 195 aa18.53■□□□□ 0.56
Trim39-203ENSMUST00000113706 Naaladl2A0A0N4SUJ3 795 aa18.52■□□□□ 0.56
Trim39-203ENSMUST00000113706 LyarQ08288 388 aaKnown RBP18.52■□□□□ 0.56
Trim39-203ENSMUST00000113706 Pank2Q3U4S0 443 aa18.52■□□□□ 0.56
Trim39-203ENSMUST00000113706 Otop3Q80UF9 577 aa18.52■□□□□ 0.56
Trim39-203ENSMUST00000113706 PdcQ9QW08 244 aa18.52■□□□□ 0.56
Trim39-203ENSMUST00000113706 Prdm11A2AGX3 565 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Cfap73J3QPZ5 306 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Jdp2P97875 163 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Spg7Q3ULF4 781 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Hps6Q8BLY7 805 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Sirt2Q8VDQ8 389 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Add3Q9QYB5 706 aaKnown RBP18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 CpdO89001 1377 aa18.52■□□□□ 0.55
Trim39-203ENSMUST00000113706 Rnf41Q8BH75 317 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Chd5A2A8L1 1946 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Csrnp1P59054 583 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Llgl2Q3TJ91 1027 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Usp28Q5I043 1051 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Suclg2Q9Z2I8 433 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ddrgk1Q80WW9 315 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Paf1Q8K2T8 535 aa18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ccdc47Q9D024 483 aaKnown RBP18.51■□□□□ 0.55
Trim39-203ENSMUST00000113706 Abl1P00520 1123 aa18.5■□□□□ 0.55
Trim39-203ENSMUST00000113706 Dnajc2P54103 621 aaKnown RBP18.5■□□□□ 0.55
Trim39-203ENSMUST00000113706 SdsQ8VBT2 327 aa18.5■□□□□ 0.55
Trim39-203ENSMUST00000113706 UvssaQ9D479 717 aa18.5■□□□□ 0.55
Trim39-203ENSMUST00000113706 Wdr33Q8K4P0 1330 aaKnown RBP18.5■□□□□ 0.55
Trim39-203ENSMUST00000113706 Nup188Q6ZQH8 1759 aa18.5■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ctr9Q62018 1173 aaKnown RBP18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Snx13Q6PHS6 957 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Bach1P97302 739 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ehmt1Q5DW34 1296 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Znf638Q61464 1960 aaKnown RBP18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Dock5B2RY04 1868 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Esyt2Q3TZZ7 845 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 VmacQ8BP01 174 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Uba5Q8VE47 403 aa18.49■□□□□ 0.55
Trim39-203ENSMUST00000113706 Cfap99A0A140LIX9 648 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 1700113H08RikE9Q9Q5 327 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Tmem179Q8BHH9 233 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ranbp6Q8BIV3 1105 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 WtapQ9ER69 396 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Epb41l3Q9WV92 929 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Cdc45Q9Z1X9 566 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Myh6Q02566 1938 aaKnown RBP18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Terb1Q8C0V1 768 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Mtmr3Q8K296 1196 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ccdc39Q9D5Y1 937 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ambra1A2AH22 1300 aa18.48■□□□□ 0.55
Trim39-203ENSMUST00000113706 Gm3893E9Q1I1 302 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Usp25P57080 1055 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Ckap2Q3V1H1 664 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Kif22Q3V300 660 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Pcsk7Q61139 770 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Gtf2a1Q99PM3 378 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Cnpy3Q9DAU1 276 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Tbc1d8Q9Z1A9 1134 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Sned1Q70E20 1403 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Mtx1P47802 317 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Mum1l1Q4VA55 681 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Adck5Q80V03 582 aa18.47■□□□□ 0.55
Trim39-203ENSMUST00000113706 Mknk2Q8CDB0 459 aa18.47■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms