RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mtmr6Q8VE11 617 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Kcnh3Q9WVJ0 1095 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Setdb1O88974 1307 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 MlecQ6ZQI3 291 aaKnown RBP14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Haus7Q8BKT8 364 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Cadps2Q8BYR5 1297 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Evc2Q8K1G2 1220 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Tomm22Q9CPQ3 142 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 H2afxP27661 143 aaKnown RBP14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Spag5Q7TME2 1165 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Slx1bQ8BX32 270 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Tgs1Q923W1 853 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Trim11Q99PQ2 467 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Greb1lB9EJV3 1913 aa14.86□□□□□ -0.03
Nup88-203ENSMUST00000108531 Cops6O88545 324 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Washc4Q3UMB9 1173 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 ZgpatQ8VDM1 511 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Magi2Q9WVQ1 1275 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Lrp6O88572 1613 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Pde8bE9Q4S1 865 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ckap2Q3V1H1 664 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Prl2c1Q5SVL9 228 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Myl10Q62082 202 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Eaf2Q91ZD6 262 aa14.85□□□□□ -0.03
Nup88-203ENSMUST00000108531 Dnajc25A2ALW5 357 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Atp8b5A3FIN4 1183 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Myo1aO88329 1043 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Slc7a1Q09143 622 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Pla2g4fQ50L41 855 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Slitrk3Q810B9 980 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Lrp5Q91VN0 1614 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ssc5dQ8BV57 1371 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ampd3O08739 766 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ccdc102aQ3TMW1 549 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ccdc174Q3U155 467 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Slc44a1Q6X893 653 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Luc7l2Q7TNC4 392 aaKnown RBP14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Brd3Q8K2F0 726 aaKnown RBP14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Wasf1Q8R5H6 559 aa14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Gnl2Q99LH1 728 aaKnown RBP14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Mrps25Q9D125 171 aaKnown RBP14.84□□□□□ -0.03
Nup88-203ENSMUST00000108531 Pard3Q99NH2 1333 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Pde4bB1AWC9 736 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Zbtb21E9Q444 1094 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Gm5624F6ZZG8 207 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 NapbP28663 298 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 CebpaP53566 359 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Znf653Q6YND2 615 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 9230110C19RikQ8CC70 267 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 CerkQ8K4Q7 531 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Sirt2Q8VDQ8 389 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Abcb6Q9DC29 842 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 ChmQ9QXG2 665 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Samd1D3YXK1 519 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Trim34bJ3QNR8 485 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Plbd2Q3TCN2 594 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Mns1Q61884 491 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Lmod1Q8BVA4 595 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Klhl30Q8C3F7 581 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Vps18Q8R307 973 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 ApobrQ8VBT6 942 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Fam76aQ922G2 307 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Nip7Q9CXK8 180 aaKnown RBP14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Fbxo3Q9DC63 480 aa14.83□□□□□ -0.04
Nup88-203ENSMUST00000108531 Cdc27A2A6Q5 825 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Bin2D3Z6Q9 489 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Kif2aP28740 705 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Trak2Q6P9N8 913 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Nme8Q715T0 586 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Abtb2Q7TQI7 1024 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Fam53cQ8BXQ8 393 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Ces1dQ8VCT4 565 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 FAM186AQ9D9R9 1790 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Diaph1O08808 1255 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 EmbP21995 330 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Specc1lQ2KN98 1118 aaKnown RBP14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Cnnm2Q3TWN3 875 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Agtpbp1Q641K1 1218 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Fez2Q6TYB5 348 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Asnsd1Q8BFS9 627 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Paf1Q8K2T8 535 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Rapgef3Q8VCC8 918 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Tubgcp2Q921G8 905 aa14.82□□□□□ -0.04
Nup88-203ENSMUST00000108531 Serpinb6bO08804 377 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Plekhf1Q3TB82 279 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Slc38a10Q5I012 1090 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Bag1Q60739 355 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Znf532Q6NXK2 1036 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Hps6Q8BLY7 805 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Amigo3Q8C2S7 508 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Rtn1Q8K0T0 780 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Myh1Q5SX40 1942 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Cdhr2E9Q7P9 1308 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Uri1Q3TLD5 531 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Tbx2Q60707 711 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Fam170aQ66LM6 333 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Krt39Q6IFX4 482 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Clec16aQ80U30 1036 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Kcnj14Q8JZN3 434 aa14.81□□□□□ -0.04
Nup88-203ENSMUST00000108531 Arl8aQ8VEH3 186 aa14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 124.8 ms