RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Fbxo2Q80UW2 297 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ddx42Q810A7 929 aaKnown RBP10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Zbtb46Q8BID6 600 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Mterf2Q8BKY8 385 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Afg3l2Q8JZQ2 802 aaKnown RBP10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Trim29Q8R2Q0 587 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Msantd4Q91YU3 345 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Rtfdc1Q99K95 307 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Vps33aQ9D2N9 598 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tmub1Q9JMG3 245 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ltbp4Q8K4G1 1666 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Myo5cE9Q1F5 1742 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Rad52P43352 420 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Adcy7P51829 1099 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Sema3gQ4LFA9 780 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Zbtb39Q6PDK0 712 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ccdc82Q6PG04 518 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Asap2Q7SIG6 958 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Suz12Q80U70 741 aaKnown RBP10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tgif2Q8C0Y1 237 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Plpp7Q91WB2 271 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Abcc6Q9R1S7 1498 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ppp1r15aP17564 657 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Nek1P51954 1203 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Shq1Q7TMX5 569 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Inpp5fQ8CDA1 1132 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Clec2iQ9WVF9 217 aa10.56□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ncoa1P70365 1447 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Prex1Q69ZK0 1650 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Nlrp12E9Q5R7 1054 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Akr1b8P45377 316 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Paxbp1P58501 919 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Fchsd2Q3USJ8 740 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tab3Q571K4 716 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 XpaQ64267 272 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 SympkQ80X82 1284 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Eno4Q8C042 619 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Utp6Q8VCY6 597 aaKnown RBP10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ints12Q9D168 461 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Zfp644E9QA22 1323 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Adamts7Q68SA9 1657 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Kif1bQ60575 1816 aaKnown RBP10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Aff3P51827 1254 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 6430531B16RikQ3V2J1 307 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ccdc84Q4VA36 332 aaKnown RBP10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 2900092C05RikQ5I0V9 184 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tnfaip3Q60769 775 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Mysm1Q69Z66 819 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 ClmQ7TSN2 230 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 6820408C15RikQ8BJX2 354 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Grpel1Q99LP6 217 aa10.55□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Znf711A2ANX9 761 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Heatr4E9Q357 955 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Bcl7cO08664 217 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Spg7Q3ULF4 781 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ppp2r5cQ60996 524 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Jade1Q6ZPI0 834 aaKnown RBP10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Pkn3Q8K045 878 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Agr3Q8R3W7 165 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Dbndd1Q9CZ00 160 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tbc1d20Q9D9I4 402 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Appbp2Q9DAX9 585 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 FliiQ9JJ28 1271 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Taf7Q9R1C0 341 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Rfx7F8VPJ6 1459 aa10.54□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Bnc1O35914 961 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Zhx1P70121 873 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Mcm2P97310 904 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Rtkn2Q14B46 604 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Cnnm2Q3TWN3 875 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tnni3kQ5GIG6 834 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 RubcnQ80U62 956 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ccdc40Q8BI79 1192 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Pi4k2bQ8CBQ5 469 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Creld1Q91XD7 420 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ppil4Q9CXG3 492 aaKnown RBP10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Thap11Q9JJD0 305 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Robo2Q7TPD3 1470 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ttc21bQ0HA38 1315 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tbc1d4Q8BYJ6 1307 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Obp2bA2BHR0 176 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Sh2d4bA6X942 431 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Gm3676D3Z236 184 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Gna15P30678 374 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Pa2g4P50580 394 aaKnown RBP10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 RenbpP82343 430 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ttll12Q3UDE2 639 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Adam1aQ60813 791 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Htatsf1Q8BGC0 757 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Oscp1Q8BHW2 379 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tmem87bQ8BKU8 555 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Atad2Q8CDM1 1040 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tmx2Q9D710 295 aaKnown RBP10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tekt1Q9DAJ2 418 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 St6galnac1Q9QZ39 526 aa10.53□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tmem165P52875 323 aa10.52□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Etaa1Q5SVT3 877 aa10.52□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Dusp9Q7TNL7 452 aa10.52□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Abtb2Q7TQI7 1024 aa10.52□□□□□ -0.72
Upf3b-201ENSMUST00000076265 OsgepQ8BWU5 335 aa10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 277.4 ms