RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 1700029H14RikE9PY36 240 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Dnm3Q8BZ98 863 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Slc51aQ8R000 340 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Dnaaf4Q8R368 420 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rbm5Q91YE7 815 aaKnown RBP8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Akt1s1Q9D1F4 257 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pes1Q9EQ61 584 aaKnown RBP8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Hmg20bQ9Z104 317 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rgs12Q8CGE9 1381 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ccdc112A0AUP1 442 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Plekhf1Q3TB82 279 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Washc4Q3UMB9 1173 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Panx2Q6IMP4 677 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Smarcc2Q6PDG5 1213 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Gimap8Q75N62 688 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Nxf7Q80SZ6 620 aaKnown RBP8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Mei4Q8BRM6 389 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Usp44Q8C2S0 711 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tmx1Q8VBT0 278 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Zcrb1Q9CZ96 217 aaKnown RBP8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Sil1Q9EPK6 465 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Xpo4Q9ESJ0 1151 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Foxo3Q9WVH4 672 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Arhgap33Q80YF9 1305 aa8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Prr29B1ARI9 187 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Kif2aP28740 705 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Paxbp1P58501 919 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Kcnd1Q03719 651 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ankrd13dQ6PD24 605 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Sept9Q80UG5 583 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Kiaa1524Q8BWY9 907 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tmem87aQ8BXN9 555 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 SowahdQ8BY98 327 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 RtcbQ99LF4 505 aaKnown RBP8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Krt24A1L317 512 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Prdm1Q60636 856 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Msl1Q6PDM1 616 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Brd2Q7JJ13 798 aaKnown RBP8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Fam160b2Q80YR2 744 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Arap2Q8BZ05 1703 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pramel3A2AHA7 463 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Gm7903A2AWL1 463 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 AV320801A2AWL3 467 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 TrdnE9Q9K5 693 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Gm15023L7MUB4 467 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rgs9O54828 675 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Plbd2Q3TCN2 594 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Limch1Q3UH68 1057 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Lrrc43Q3V0L5 667 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pnpla2Q8BJ56 486 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 HlfQ8BW74 295 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Clstn1Q9EPL2 979 aa8.28□□□□□ -1.08
Clrn1-202ENSMUST00000055636 GalcP54818 684 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Nbr1P97432 988 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Tshz1Q5DTH5 1084 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Myl10Q62082 202 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Gpatch3Q8BIY1 525 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Pms1Q8K119 917 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Hps3Q91VB4 1002 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Col4a3bpQ9EQG9 624 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mroh6V9GX81 722 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Npc1l1Q6T3U4 1333 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Kndc1Q0KK55 1742 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 4930523C07RikE9Q2T4 99 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Speer4dL7N216 212 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Bin1O08539 588 aaKnown RBP8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mapkapk5O54992 473 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Prl3d1P18121 224 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Fam83bQ0VBM2 1012 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ell2Q3UKU1 639 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ube3cQ80U95 1083 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Cdca8Q8BHX3 289 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 CpzQ8R4V4 654 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mrpl44Q9CY73 333 aaKnown RBP8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Kcnq5Q9JK45 933 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Nhsl1Q8CAF4 1587 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Greb1lB9EJV3 1913 aa8.27□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Gm4340L7N2C4 268 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Actn3O88990 900 aaKnown RBP8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ehd2Q8BH64 543 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Wdr3Q8BHB4 942 aaKnown RBP8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Afg3l2Q8JZQ2 802 aaKnown RBP8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 CerkQ8K4Q7 531 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Sumf1Q8R0F3 372 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ces1dQ8VCT4 565 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Appbp2Q9DAX9 585 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Magi2Q9WVQ1 1275 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Zbtb21E9Q444 1094 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Pcdhb9E9Q5G2 828 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 GabrdP22933 449 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Spag5Q7TME2 1165 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Luzp1Q8R4U7 1068 aaKnown RBP8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Usp42B2RQC2 1324 aaKnown RBP8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Kdm3aQ6PCM1 1323 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 EvplQ9D952 2035 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Gm7347D3YYI9 267 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Speer4aF8VPX6 267 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Abl1P00520 1123 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Kiaa0319Q5SZV5 1081 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Fsd1Q7TPM6 496 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms