RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMEM160Q9NX00 188 aa11.76□□□□□ -0.53
SCARB2-216ENST00000639300 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
SCARB2-216ENST00000639300 E7EQL1 145 aa11.76□□□□□ -0.53
SCARB2-216ENST00000639300 CEP295Q9C0D2 2601 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 DDB2Q92466 427 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 MMP23AO75900 390 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 WT1P19544 449 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-216ENST00000639300 HAPLN4Q86UW8 402 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 SIGLEC9Q9Y336 463 aa11.75□□□□□ -0.53
SCARB2-216ENST00000639300 ZNF134P52741 427 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 TSKUQ8WUA8 353 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 FABP5P3A8MUU1 101 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 RPL15P61313 204 aaKnown RBP11.74□□□□□ -0.53
SCARB2-216ENST00000639300 ERASQ7Z444 233 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 NUP37Q8NFH4 326 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 PRSS2P07478 247 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 FAM169BQ8N8A8 192 aa11.74□□□□□ -0.53
SCARB2-216ENST00000639300 SLC25A39Q9BZJ4 359 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-216ENST00000639300 SOX21Q9Y651 276 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-216ENST00000639300 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 H7C2G1 150 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 SSC4DQ8WTU2 575 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 FAM71F2Q6NXP2 309 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 A0A1B0GWJ7 208 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 RPL13AP40429 203 aaKnown RBP11.73□□□□□ -0.53
SCARB2-216ENST00000639300 ZNF56Q15929 161 aa11.73□□□□□ -0.53
SCARB2-216ENST00000639300 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 ARL6IP6Q8N6S5 226 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 ASCL2Q99929 193 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 MIEN1Q9BRT3 115 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 LINC00614P0C842 121 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 C15orf32Q32M92 178 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 NIT1Q86X76 327 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 FAM215AQ9Y5M1 114 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 K7ERU9 68 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 TCRAP04437 139 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 FBLN7Q53RD9 439 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 TPTE2P1Q5T6R2 138 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 VMO1Q7Z5L0 202 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 MED12LQ86YW9 2145 aa11.72□□□□□ -0.53
SCARB2-216ENST00000639300 H3BVH4 76 aa11.71□□□□□ -0.53
SCARB2-216ENST00000639300 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
SCARB2-216ENST00000639300 Q6AWC8 147 aa11.71□□□□□ -0.53
SCARB2-216ENST00000639300 LCN12Q6JVE5 192 aa11.71□□□□□ -0.53
SCARB2-216ENST00000639300 SYT8Q8NBV8 401 aa11.71□□□□□ -0.53
SCARB2-216ENST00000639300 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-216ENST00000639300 A0A0G2JLM5 398 aa11.71□□□□□ -0.53
SCARB2-216ENST00000639300 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-216ENST00000639300 PFN1P07737 140 aaKnown RBP11.71□□□□□ -0.53
SCARB2-216ENST00000639300 Q8NFD4 153 aa11.71□□□□□ -0.53
SCARB2-216ENST00000639300 LYRM7Q5U5X0 104 aa11.71□□□□□ -0.54
SCARB2-216ENST00000639300 IGFL4Q6B9Z1 124 aa11.71□□□□□ -0.54
SCARB2-216ENST00000639300 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.54
SCARB2-216ENST00000639300 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 SRD5A1P18405 259 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 VDAC2P45880 294 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-216ENST00000639300 C5orf64Q2M2E5 130 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 TMEM14BQ9NUH8 114 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 LAMTOR2Q9Y2Q5 125 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 FABP2P12104 132 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 TRGV9Q99603 122 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 FOXC2Q99958 501 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 IGLV1-44P01699 117 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 BRD3OSQ6XYD6 125 aa11.7□□□□□ -0.54
SCARB2-216ENST00000639300 CEACAM4O75871 244 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 CIDEAO60543 219 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 CNTFRP26992 372 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 ASIPP42127 132 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 Q8TAT8 98 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 SMAD7O15105 426 aaKnown RBP11.69□□□□□ -0.54
SCARB2-216ENST00000639300 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
SCARB2-216ENST00000639300 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
SCARB2-216ENST00000639300 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 TSPOP30536 169 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 ZNF138P52744 262 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 OBSL1O75147 1896 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 NPIPB6E9PJ23 425 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 K7EM74 188 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 C10orf91Q5T1B1 145 aa11.68□□□□□ -0.54
SCARB2-216ENST00000639300 C11orf53Q8IXP5 236 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms