RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 X6R8D5 127 aa12.86□□□□□ -0.35
PNKP-230ENST00000638016 TRAV6A0A075B6T7 132 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 SMCO3A2RU48 225 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 H3BMM0 161 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 LYRM1O43325 122 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 LY6G6CO95867 125 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 IFNA21P01568 189 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 IGKV3-20P01619 116 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 FXYD7P58549 80 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 RPP30P78346 268 aaKnown RBP12.85□□□□□ -0.35
PNKP-230ENST00000638016 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
PNKP-230ENST00000638016 C17orf77Q96MU5 243 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 LINC00052Q96N35 136 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 DOK5Q9P104 306 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 XCL2Q9UBD3 114 aa12.85□□□□□ -0.35
PNKP-230ENST00000638016 F6UB75 175 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 FABP1P07148 127 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 METTL15P1P0C7V9 234 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 ORM2P19652 201 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
PNKP-230ENST00000638016 ZBTB8BQ8NAP8 495 aaPredicted RBP12.84□□□□□ -0.35
PNKP-230ENST00000638016 MITD1Q8WV92 249 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 SEC22CQ9BRL7 303 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 GSKIPQ9P0R6 139 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 RCL1Q9Y2P8 373 aaKnown RBP12.84□□□□□ -0.35
PNKP-230ENST00000638016 KMT2AQ03164 3969 aa12.84□□□□□ -0.35
PNKP-230ENST00000638016 ZNF705EA8MWA4 302 aaPredicted RBP12.83□□□□□ -0.36
PNKP-230ENST00000638016 HLA-DRB4P13762 266 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 NUP62P37198 522 aaPredicted RBP12.83□□□□□ -0.36
PNKP-230ENST00000638016 OR8I2Q8N0Y5 310 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 C20orf173Q96LM9 149 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 HLA-DRB4X5D2U9 266 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 VPS13DQ5THJ4 4388 aa12.83□□□□□ -0.36
PNKP-230ENST00000638016 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
PNKP-230ENST00000638016 TCRBP04435 133 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 ARL16Q0P5N6 197 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 C1orf194Q5T5A4 169 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 TMEM14EPQ6UXP3 125 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 TMEM144Q7Z5S9 345 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 SMIM8Q96KF7 97 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
PNKP-230ENST00000638016 ZNF98A6NK75 572 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
PNKP-230ENST00000638016 IGFL4Q6B9Z1 124 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 CYP2G1PQ6ZSU1 146 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 BPIFCQ8NFQ6 507 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 SAV1Q9H4B6 383 aaPredicted RBP12.81□□□□□ -0.36
PNKP-230ENST00000638016 SEPSECSQ9HD40 501 aaKnown RBP12.81□□□□□ -0.36
PNKP-230ENST00000638016 NUDT15Q9NV35 164 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 TBC1D24Q9ULP9 559 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
PNKP-230ENST00000638016 KLK5Q9Y337 293 aaPredicted RBP12.81□□□□□ -0.36
PNKP-230ENST00000638016 PSMB3P49720 205 aa12.8□□□□□ -0.36
PNKP-230ENST00000638016 TMEM41BQ5BJD5 291 aa12.8□□□□□ -0.36
PNKP-230ENST00000638016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
PNKP-230ENST00000638016 ZNF767PQ75MW2 155 aa12.8□□□□□ -0.36
PNKP-230ENST00000638016 RSG1Q9BU20 258 aa12.8□□□□□ -0.36
PNKP-230ENST00000638016 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
PNKP-230ENST00000638016 PRB4P10163 310 aaPredicted RBP12.79□□□□□ -0.36
PNKP-230ENST00000638016 MIFP14174 115 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 SLC38A11Q08AI6 406 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 ZNF709Q8N972 641 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 OR4B1Q8NGF8 309 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 TMEM147Q9BVK8 224 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 MFFQ9GZY8 342 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
PNKP-230ENST00000638016 C7orf66A4D0T2 115 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 FAM25EA8MYX2 175 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 H3BRN7 92 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 IL5P05113 134 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 LINC00869P0C866 280 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 HLA-DMBP28068 263 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 ID1P41134 155 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 DLK1P80370 383 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 FOXI2Q6ZQN5 318 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 Q6ZTC4 211 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 C16orf92Q96LL3 132 aa12.78□□□□□ -0.36
PNKP-230ENST00000638016 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
PNKP-230ENST00000638016 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
PNKP-230ENST00000638016 TRAV8-2A0A0B4J237 113 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 ISLRO14498 428 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 TSC22D2O75157 780 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 DEDDO75618 318 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 CFDP00746 253 aaPredicted RBP12.77□□□□□ -0.37
PNKP-230ENST00000638016 GALR1P47211 349 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 CNPY1Q3B7I2 92 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 RPP25LQ8N5L8 163 aaKnown RBP12.77□□□□□ -0.37
PNKP-230ENST00000638016 RNF182Q8N6D2 247 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 OR10P1Q8NGE3 313 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 ZNF431Q8TF32 576 aaPredicted RBP12.77□□□□□ -0.37
PNKP-230ENST00000638016 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 SLC45A2Q9UMX9 530 aa12.77□□□□□ -0.37
PNKP-230ENST00000638016 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
PNKP-230ENST00000638016 K7EPK0 472 aa12.76□□□□□ -0.37
PNKP-230ENST00000638016 OR5G3P0C626 314 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms