RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 EFNA2O43921 213 aa13.21□□□□□ -0.3
CLN5-208ENST00000636183 LMO1P25800 156 aa13.21□□□□□ -0.3
CLN5-208ENST00000636183 CHD5Q8TDI0 1954 aa13.21□□□□□ -0.3
CLN5-208ENST00000636183 IGKV2D-24A0A075B6R9 120 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 Q6ZS92 163 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 GATA3P23771 443 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 TEX43Q6ZNM6 134 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 CADP27708 2225 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 TRBV6-7A0A0A0MS04 114 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 IGF2BP2-AS1Q96M15 143 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 TRAV8-2A0A0B4J237 113 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 M0R2P5 195 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 DUTP33316 252 aaKnown RBP13.2□□□□□ -0.3
CLN5-208ENST00000636183 ORMDL2Q53FV1 153 aa13.2□□□□□ -0.3
CLN5-208ENST00000636183 DIDO1Q9BTC0 2240 aaKnown RBP13.19□□□□□ -0.3
CLN5-208ENST00000636183 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
CLN5-208ENST00000636183 A0A0J9YY99 117 aa13.19□□□□□ -0.3
CLN5-208ENST00000636183 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
CLN5-208ENST00000636183 VWC2Q2TAL6 325 aa13.19□□□□□ -0.3
CLN5-208ENST00000636183 PPP1R3EQ9H7J1 279 aa13.19□□□□□ -0.3
CLN5-208ENST00000636183 FAM186AA6NE01 2351 aa13.19□□□□□ -0.3
CLN5-208ENST00000636183 STRCP1A6NGW2 1772 aa13.19□□□□□ -0.3
CLN5-208ENST00000636183 GGNQ86UU5 652 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 Q8TAT8 98 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 SNHG12Q9BXW3 62 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 CACNA1EQ15878 2313 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 OOSP1A8MZH6 123 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 RASL10AQ92737 203 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
CLN5-208ENST00000636183 ARFGEF3Q5TH69 2177 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 NCR2O95944 276 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 H2BFSP57053 126 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 HEPN1Q6WQI6 88 aa13.18□□□□□ -0.3
CLN5-208ENST00000636183 DKK1O94907 266 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 PATJQ8NI35 1801 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 MPTX1A8MV57 137 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 F2Z2F3 143 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 DPM2O94777 84 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 UBE2E1P51965 193 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 WISP1O95388 367 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 GAFA1Q96PS6 74 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 DAZ1Q9NQZ3 744 aaKnown RBP13.17□□□□□ -0.3
CLN5-208ENST00000636183 SMIM6P0DI80 62 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 CRYGSP22914 178 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 SPINK13Q1W4C9 94 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 MDS2Q8NDY4 140 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 KLK9Q9UKQ9 250 aa13.17□□□□□ -0.3
CLN5-208ENST00000636183 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 IGHV1-69DA0A0B4J2H0 117 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 IGHV1-69P01742 117 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 LY75O60449 1722 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 FER1L5A0AVI2 2057 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 ZNF138P52744 262 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
CLN5-208ENST00000636183 DOCK7Q96N67 2140 aa13.16□□□□□ -0.3
CLN5-208ENST00000636183 SLC25A48Q6ZT89 311 aaKnown RBP13.16□□□□□ -0.3
CLN5-208ENST00000636183 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
CLN5-208ENST00000636183 TCRAP04437 139 aa13.15□□□□□ -0.3
CLN5-208ENST00000636183 AZU1P20160 251 aa13.15□□□□□ -0.3
CLN5-208ENST00000636183 VWC2LB2RUY7 222 aa13.15□□□□□ -0.3
CLN5-208ENST00000636183 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
CLN5-208ENST00000636183 ANKRD36A6QL64 1941 aa13.15□□□□□ -0.3
CLN5-208ENST00000636183 FOXL1Q12952 345 aa13.15□□□□□ -0.3
CLN5-208ENST00000636183 LINC00271P0C7V0 271 aa13.15□□□□□ -0.31
CLN5-208ENST00000636183 LAGE3Q14657 143 aa13.15□□□□□ -0.31
CLN5-208ENST00000636183 C9orf139Q6ZV77 190 aa13.15□□□□□ -0.31
CLN5-208ENST00000636183 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 GAGE6Q13070 117 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 PARP14Q460N5 1801 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
CLN5-208ENST00000636183 A0A1B0GTI1 187 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 A0A1B0GWJ7 208 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 LINC00587B1AMM8 73 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 PUSL1Q8N0Z8 303 aaKnown RBP13.14□□□□□ -0.31
CLN5-208ENST00000636183 CTAG1AP78358 180 aa13.14□□□□□ -0.31
CLN5-208ENST00000636183 PGPEP1LA6NFU8 196 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 PFN2P35080 140 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 RPRMLQ8N4K4 120 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 IGKCP01834 107 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 ATP5L2Q7Z4Y8 100 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 GVINP1Q7Z2Y8 2422 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 H0YJW9 148 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
CLN5-208ENST00000636183 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 ITGB1BP1O14713 200 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
CLN5-208ENST00000636183 EFNB3Q15768 340 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 TAL2Q16559 108 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 TCTEX1D4Q5JR98 221 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 RASL11AQ6T310 242 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 WDR90Q96KV7 1748 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 NXPH4O95158 308 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
CLN5-208ENST00000636183 SPCS1Q9Y6A9 102 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms