RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 ZNF415Q09FC8 603 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 EFNB3Q15768 340 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 NEU4Q8WWR8 484 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-218ENST00000635120 TMEM133Q9H2Q1 129 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 TGFBR3LH3BV60 316 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 OSTCQ9NRP0 149 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 WFDC12Q8WWY7 111 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 SEC11AP67812 179 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 ZNF479Q96JC4 524 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 NUP210LQ5VU65 1888 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 LY6G6FQ5SQ64 297 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 RPL15P61313 204 aaKnown RBP7.58□□□□□ -1.2
CSMD1-218ENST00000635120 CRIM1Q9NZV1 1036 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
CSMD1-218ENST00000635120 C17orf100A8MU93 164 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 LHX2P50458 406 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 LINC00158P58513 81 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 HSD52Q0P140 79 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 CD300EQ496F6 205 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-218ENST00000635120 MORN2Q502X0 79 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 SIGLEC15Q6ZMC9 328 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 CHCHD5Q9BSY4 110 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 IGKV2-40A0A087WW87 121 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-218ENST00000635120 IGKV2D-40P01614 121 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-218ENST00000635120 ERVK11-1P61568 191 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 YPEL1O60688 119 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 PRR31Q5SQ13 230 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 YPEL2Q96QA6 119 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 TSKUQ8WUA8 353 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 IGHV3-73A0A0B4J1V6 119 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 NCR2O95944 276 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 GHRHP01286 108 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 ASCL4Q6XD76 172 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 C9orf106Q8NAJ2 232 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 IMMP1LQ96LU5 166 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 TRGV11A0A075B6L2 103 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 A0A1W2PRE2 83 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 OR9G9P0C7N8 305 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 OR10W1Q8NGF6 305 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 F2Z2F3 143 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 TIMP3P35625 211 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 HEPN1Q6WQI6 88 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 ZNF562Q6V9R5 426 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-218ENST00000635120 TEX38Q6PEX7 206 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 TMEM238C9JI98 176 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 VGLL1Q99990 258 aa7.57□□□□□ -1.2
CSMD1-218ENST00000635120 PSG8Q9UQ74 426 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 F8VVB4 439 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 F8VWA3 439 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 EXOC3-AS1Q8N2X6 119 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 MORN3Q6PF18 240 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-218ENST00000635120 JPT2Q9H910 190 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 C15orf32Q32M92 178 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 HIST3H2BBQ8N257 126 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 LYZL4Q96KX0 146 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 DPH3P1Q9H4G8 78 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 NAPSAO96009 420 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 AMBPP02760 352 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 CSRP3P50461 194 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 OR9G4Q8NGQ1 327 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 DLEU1O43261 78 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 TDGF1P3P51864 188 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 SLC25A48Q6ZT89 311 aaKnown RBP7.56□□□□□ -1.2
CSMD1-218ENST00000635120 ERG28Q9UKR5 140 aa7.56□□□□□ -1.2
CSMD1-218ENST00000635120 A0A0A6YYD4 124 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 CDK2AP2O75956 126 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 CDKN1AP38936 164 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 SLC25A28Q96A46 364 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 WBP1Q96G27 269 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 ADARB2-AS1A8MUL3 147 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 CD33P20138 364 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 PRCDQ00LT1 54 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 NPIPB5A8MRT5 1133 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 FAM90A2PQ658T7 463 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 D6R8Y8 96 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 LINC00271P0C7V0 271 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 DUTP33316 252 aaKnown RBP7.55□□□□□ -1.2
CSMD1-218ENST00000635120 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 LINC00114Q6XXX2 140 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 ZCCHC24Q8N2G6 241 aaKnown RBP7.55□□□□□ -1.2
CSMD1-218ENST00000635120 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
CSMD1-218ENST00000635120 FAM90A9PA6NNJ1 464 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 PAX8Q06710 450 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 PRDM6Q9NQX0 595 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 H0YIZ8 118 aa7.55□□□□□ -1.2
CSMD1-218ENST00000635120 TIMM23O14925 209 aa7.54□□□□□ -1.2
CSMD1-218ENST00000635120 PAX4O43316 350 aa7.54□□□□□ -1.2
CSMD1-218ENST00000635120 HIST1H4AP62805 103 aaKnown RBP7.54□□□□□ -1.2
CSMD1-218ENST00000635120 LAMTOR3Q9UHA4 124 aa7.54□□□□□ -1.2
CSMD1-218ENST00000635120 TLN1Q9Y490 2541 aaKnown RBP7.54□□□□□ -1.2
CSMD1-218ENST00000635120 TRAV5A0A0B4J249 113 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms