RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MGST1P10620 155 aaKnown RBP15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 YPEL3P61236 119 aaPredicted RBP15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 FAM120AOSQ5T036 256 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 PACRGQ96M98 296 aaPredicted RBP15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 CCL19Q99731 98 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 SPOCK3Q9BQ16 436 aa15.53■□□□□ 0.08
PCDHB11-202ENST00000624887 TRAV30A0A087WSZ9 112 aa15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 XKRY2A2RUG3 117 aa15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 SLC25A5P05141 298 aaKnown RBP15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 EGR2P11161 476 aaPredicted RBP15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 GNG5P63218 68 aa15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 JOSD1Q15040 202 aaPredicted RBP15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 TMEM183BQ1AE95 376 aa15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 IBA57Q5T440 356 aaKnown RBP15.52■□□□□ 0.07
PCDHB11-202ENST00000624887 HLA-DRB1P01911 266 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 FABP4P15090 132 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 MFAP4P55083 255 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 BAGE2Q86Y30 109 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 ZNF491Q8N8L2 437 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 C2orf88Q9BSF0 95 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 KLF12Q9Y4X4 402 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 ZFYVE26Q68DK2 2539 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 TRAV34A0A0B4J273 112 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 NPFFO15130 113 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 GNG7O60262 68 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 C5orf17Q8NAS9 161 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 FAM168AQ92567 244 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 PIMREGQ9BSJ6 248 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 SHANK2-AS3Q9BTD1 123 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 THYN1Q9P016 225 aa15.51■□□□□ 0.07
PCDHB11-202ENST00000624887 HIST1H1EP10412 219 aaKnown RBP15.5■□□□□ 0.07
PCDHB11-202ENST00000624887 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
PCDHB11-202ENST00000624887 NHLRC2Q8NBF2 726 aa15.5■□□□□ 0.07
PCDHB11-202ENST00000624887 RNF125Q96EQ8 232 aa15.5■□□□□ 0.07
PCDHB11-202ENST00000624887 TMEM68Q96MH6 324 aa15.5■□□□□ 0.07
PCDHB11-202ENST00000624887 Q9H3A6 140 aa15.5■□□□□ 0.07
PCDHB11-202ENST00000624887 CENPVL3A0A0U1RRI6 287 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 WI2-2373I1.2A0A1W2PRP0 233 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 H3BRN7 92 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 PAX8Q06710 450 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 SRSF1Q07955 248 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 OR8I2Q8N0Y5 310 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 NOL4LQ96MY1 436 aaPredicted RBP15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 ATG101Q9BSB4 218 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 S4R3C0 116 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 F8W735 103 aaPredicted RBP15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 UBE2G1P62253 170 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 FAM231DQ6ZW35 169 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 C10orf105Q8TEF2 133 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 SMIM12Q96EX1 92 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 ZNF586Q9NXT0 402 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 C21orf62Q9NYP8 219 aa15.49■□□□□ 0.07
PCDHB11-202ENST00000624887 SPTAN1Q13813 2472 aaKnown RBP15.48■□□□□ 0.07
PCDHB11-202ENST00000624887 EPG5Q9HCE0 2579 aa15.48■□□□□ 0.07
PCDHB11-202ENST00000624887 NDUFS8O00217 210 aa15.48■□□□□ 0.07
PCDHB11-202ENST00000624887 IL4P05112 153 aa15.48■□□□□ 0.07
PCDHB11-202ENST00000624887 IGHV4-61A0A0C4DH41 118 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 A0A1B0GV90 55 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 H3BTX0 84 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 NDUFB8O95169 186 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 DOPEY1Q5JWR5 2465 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 BPIFA4PQ86YQ2 179 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 HSPB9Q9BQS6 159 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 OTORQ9NRC9 128 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 SMIM27A0A1W2PRY6 76 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 VWC2LB2RUY7 222 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 TCRAP04437 139 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 RNF24Q9Y225 148 aa15.47■□□□□ 0.07
PCDHB11-202ENST00000624887 ZNF705GA8MUZ8 300 aaPredicted RBP15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 OR2J3O76001 311 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 CBLN1P23435 193 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 RAB4BP61018 213 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 RPL19P84098 196 aaKnown RBP15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 Q56UQ5 140 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 FMC1Q96HJ9 113 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 GPR82Q96P67 336 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 C7orf69Q9H7B7 122 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 SERTAD4Q9NUC0 356 aa15.46■□□□□ 0.07
PCDHB11-202ENST00000624887 COL12A1Q99715 3063 aa15.46■□□□□ 0.06
PCDHB11-202ENST00000624887 TRBV9A0A0B4J1U6 114 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 ADMP35318 185 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 S100A7AQ86SG5 101 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 TMEM190Q8WZ59 177 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 RPH3ALQ9UNE2 315 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 ZNF462Q96JM2 2506 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 ABCA2Q9BZC7 2435 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 AMBPP02760 352 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 USF2Q15853 346 aaPredicted RBP15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 CLEC2AQ6UVW9 174 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 FAM110DQ8TAY7 271 aaPredicted RBP15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 MBD6Q96DN6 1003 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 MLST8Q9BVC4 326 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 GNB1LQ9BYB4 327 aa15.45■□□□□ 0.06
PCDHB11-202ENST00000624887 TRBV19A0A075B6N1 114 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 A8MWP6 167 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 IGLC2P0DOY2 106 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 GZMBP10144 247 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 FCGR2BP31994 310 aaPredicted RBP15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 IER3P46695 156 aa15.44■□□□□ 0.06
PCDHB11-202ENST00000624887 ATP5J2P56134 94 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms