RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 LYZL2Q7Z4W2 148 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 DTD1Q8TEA8 209 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 FAM210BQ96KR6 192 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 NIPSNAP3BQ9BS92 247 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 DKK2Q9UBU2 259 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 PKD1P98161 4303 aa11.54□□□□□ -0.56
CD99-211ENST00000623253 TOMM40O96008 361 aa11.53□□□□□ -0.56
CD99-211ENST00000623253 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
CD99-211ENST00000623253 KLF9Q13886 244 aaPredicted RBP11.53□□□□□ -0.56
CD99-211ENST00000623253 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
CD99-211ENST00000623253 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
CD99-211ENST00000623253 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
CD99-211ENST00000623253 RBKSQ9H477 322 aa11.53□□□□□ -0.56
CD99-211ENST00000623253 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 PSG1P11464 419 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 ID1P41134 155 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 RNF212Q495C1 297 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 PYDC2Q56P42 97 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 TMED4Q7Z7H5 227 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 TOMM5Q8N4H5 51 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 OR1S1Q8NH92 325 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 COQ8AQ8NI60 647 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 TRIM63Q969Q1 353 aa11.52□□□□□ -0.57
CD99-211ENST00000623253 C7orf50Q9BRJ6 194 aaKnown RBP11.52□□□□□ -0.57
CD99-211ENST00000623253 TEX48A0A1B0GUV7 120 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 TMEM128Q5BJH2 165 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 GSG1LQ6UXU4 331 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 DEDD2Q8WXF8 326 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 WDR12Q9GZL7 423 aaKnown RBP11.51□□□□□ -0.57
CD99-211ENST00000623253 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 SAV1Q9H4B6 383 aaPredicted RBP11.51□□□□□ -0.57
CD99-211ENST00000623253 PFDN2Q9UHV9 154 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 GOLT1BQ9Y3E0 138 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 MUC4Q99102 2169 aa11.51□□□□□ -0.57
CD99-211ENST00000623253 HBE1P02100 147 aa11.5□□□□□ -0.57
CD99-211ENST00000623253 S100A5P33763 92 aa11.5□□□□□ -0.57
CD99-211ENST00000623253 GPX4P36969 197 aaPredicted RBP11.5□□□□□ -0.57
CD99-211ENST00000623253 NUP62P37198 522 aaPredicted RBP11.5□□□□□ -0.57
CD99-211ENST00000623253 TMEM88Q6PEY1 159 aa11.5□□□□□ -0.57
CD99-211ENST00000623253 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
CD99-211ENST00000623253 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
CD99-211ENST00000623253 SLC25A21Q9BQT8 299 aaPredicted RBP11.5□□□□□ -0.57
CD99-211ENST00000623253 TMED3Q9Y3Q3 217 aa11.5□□□□□ -0.57
CD99-211ENST00000623253 YTHDF2Q9Y5A9 579 aaKnown RBP11.5□□□□□ -0.57
CD99-211ENST00000623253 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 CCDC160A6NGH7 325 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 PITX3O75364 302 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 SLC25A6P12236 298 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 VAMP1P23763 118 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 ZNF709Q8N972 641 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 SLC35E1Q96K37 410 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 V9GYH0 126 aa11.49□□□□□ -0.57
CD99-211ENST00000623253 ZFP92A6NM28 416 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 F6UB75 175 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 FABP1P07148 127 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 PSMB3P49720 205 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 DAD1P61803 113 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 RAB11AP62491 216 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 PSG9Q00887 426 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 ZNF79Q15937 498 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 OR8G2PQ6IF36 304 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 LRTM2Q8N967 370 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 PPP1R14BQ96C90 147 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 ATG101Q9BSB4 218 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 MAGT1Q9H0U3 335 aa11.48□□□□□ -0.57
CD99-211ENST00000623253 C16orf90A8MZG2 172 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 MED6O75586 246 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 GAMTQ14353 236 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 OXA1LQ15070 435 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 RRN3P1Q2M238 152 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 C1orf158Q8N1D5 194 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
CD99-211ENST00000623253 IGKV1D-37A0A075B6S9 117 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 SFT2D2O95562 160 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 LYZP61626 148 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 ZNF90Q03938 601 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 CCDC190Q86UF4 302 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 CLUHP3Q96NS8 147 aa11.46□□□□□ -0.57
CD99-211ENST00000623253 CIB3Q96Q77 187 aaPredicted RBP11.46□□□□□ -0.57
CD99-211ENST00000623253 IAPPP10997 89 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
CD99-211ENST00000623253 TNP2Q05952 138 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 PPP1R1AQ13522 171 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 OR2F1Q13607 317 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 SPANXN2Q5MJ10 180 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 TRGV9Q99603 122 aa11.45□□□□□ -0.58
CD99-211ENST00000623253 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
CD99-211ENST00000623253 SNRPGP15A8MWD9 76 aa11.44□□□□□ -0.58
CD99-211ENST00000623253 ISLRO14498 428 aa11.44□□□□□ -0.58
CD99-211ENST00000623253 SOCS3O14543 225 aa11.44□□□□□ -0.58
CD99-211ENST00000623253 UBE2MP61081 183 aaKnown RBP11.44□□□□□ -0.58
CD99-211ENST00000623253 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
CD99-211ENST00000623253 MAPKAPK5-AS1Q8N8E1 139 aa11.44□□□□□ -0.58
CD99-211ENST00000623253 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms