RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
PTPN9-206ENST00000618819 SIGLEC12Q96PQ1 595 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 H3BMG7 143 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 TIMM23O14925 209 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 CRLF1O75462 422 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 LYZL4Q96KX0 146 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
PTPN9-206ENST00000618819 MMP23AO75900 390 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 GAGE7O76087 117 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 RREB1Q92766 1687 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 LOC102723996A0A087X1L8 192 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 UBE2E2Q96LR5 201 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 SS18Q15532 418 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 ANKRD29Q8N6D5 301 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 TMEM133Q9H2Q1 129 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 IGHG4P01861 327 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
PTPN9-206ENST00000618819 UTF1Q5T230 341 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
PTPN9-206ENST00000618819 DSCR8Q96T75 97 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 ESPL1Q14674 2120 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 IGHV1-2P23083 117 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 DOCK9Q9BZ29 2069 aa11.92□□□□□ -0.5
PTPN9-206ENST00000618819 CT83Q5H943 113 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 CTHRC1Q96CG8 243 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 FAM90A9PA6NNJ1 464 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 C19orf48Q6RUI8 117 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 TIAF1O95411 115 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 SAP30O75446 220 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 C15orf32Q32M92 178 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 SLC25A45Q8N413 288 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
PTPN9-206ENST00000618819 J3QW42 95 aa11.9□□□□□ -0.5
PTPN9-206ENST00000618819 A0A1B0GW64 132 aa11.9□□□□□ -0.5
PTPN9-206ENST00000618819 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
PTPN9-206ENST00000618819 NXPH4O95158 308 aa11.9□□□□□ -0.5
PTPN9-206ENST00000618819 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
PTPN9-206ENST00000618819 TMEM219Q86XT9 240 aa11.9□□□□□ -0.5
PTPN9-206ENST00000618819 A0A1W2PPM0 123 aa11.9□□□□□ -0.51
PTPN9-206ENST00000618819 NDUFC2O95298 119 aa11.9□□□□□ -0.51
PTPN9-206ENST00000618819 NBL1P41271 181 aa11.9□□□□□ -0.51
PTPN9-206ENST00000618819 UCNP55089 124 aa11.9□□□□□ -0.51
PTPN9-206ENST00000618819 CFHR2P36980 270 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 STPG1Q5TH74 334 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 IGKV1-9A0A0C4DH69 117 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 ADCYAP1P18509 176 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 AMTNQ6UX39 209 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 PRSS22Q9GZN4 317 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 SCRT2Q9NQ03 307 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 TRIP12Q14669 1992 aaPredicted RBP11.89□□□□□ -0.51
PTPN9-206ENST00000618819 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 TMEM213A2RRL7 107 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 SMIM10L1P0DMW3 83 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 SMIM10Q96HG1 83 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 AKAP11Q9UKA4 1901 aa11.89□□□□□ -0.51
PTPN9-206ENST00000618819 LIME1Q9H400 295 aa11.88□□□□□ -0.51
PTPN9-206ENST00000618819 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-206ENST00000618819 ALS2Q96Q42 1657 aa11.88□□□□□ -0.51
PTPN9-206ENST00000618819 ARMS2P0C7Q2 107 aa11.88□□□□□ -0.51
PTPN9-206ENST00000618819 WBP1Q96G27 269 aa11.88□□□□□ -0.51
PTPN9-206ENST00000618819 CHCHD2Q9Y6H1 151 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-206ENST00000618819 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
PTPN9-206ENST00000618819 PAQR4Q8N4S7 273 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-206ENST00000618819 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
PTPN9-206ENST00000618819 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 GFI1Q99684 422 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 KLHDC3Q9BQ90 382 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 RALGAPA1Q6GYQ0 2036 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 SRSF7Q16629 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPN9-206ENST00000618819 KNCNA6PVL3 124 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 C20orf144Q9BQM9 153 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 TRAV1-1A0A0B4J248 108 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 EGR2P11161 476 aaPredicted RBP11.87□□□□□ -0.51
PTPN9-206ENST00000618819 CFHR3Q02985 330 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 C5orf24Q7Z6I8 188 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 BAALCQ8WXS3 180 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 IGLC2P0DOY2 106 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 IGLC3P0DOY3 106 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 CEND1Q8N111 149 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 WFDC9Q8NEX5 89 aa11.87□□□□□ -0.51
PTPN9-206ENST00000618819 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
PTPN9-206ENST00000618819 MYO16Q9Y6X6 1858 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 LILRA1O75019 489 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 BVES-AS1Q5T3Y7 98 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 TDRD6O60522 2096 aaKnown RBP11.86□□□□□ -0.51
PTPN9-206ENST00000618819 NKAPP1Q8N9T2 125 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms