RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 NUDT10Q8NFP7 164 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 NUDT11Q96G61 164 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 C11orf42Q8N5U0 333 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 DDB2Q92466 427 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 LEPROTL1O95214 131 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 MINOS1Q5TGZ0 78 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 MINOS1-NBL1R4GNA1 71 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 CPAMD8Q8IZJ3 1885 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 BRWD1-AS2P59051 145 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 VWC2Q2TAL6 325 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 ODF3L1Q8IXM7 274 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
PPP4R3B-206ENST00000616407 UTF1Q5T230 341 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 ATOH7Q8N100 152 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 TBL2Q9Y4P3 447 aaKnown RBP10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 A0A1B0GUT8 65 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 SH2D7A6NKC9 451 aaPredicted RBP10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 OOSP1A8MZH6 123 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 NDUFS7O75251 213 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 AMBPP02760 352 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 PSG8Q9UQ74 426 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 TGFAP01135 160 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 HTN1P15515 57 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 FCER1GP30273 86 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 C22orf46C9J442 243 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 C15orf32Q32M92 178 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 TM4SF20Q53R12 229 aa10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRR20EP86478 221 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRR20CP86479 221 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRR20DP86480 221 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRR20BP86481 221 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRR20AP86496 221 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 EXPH5Q8NEV8 1989 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 TCRAP04437 139 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 PYY3Q5JQD4 70 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRR31Q5SQ13 230 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 FNDC4Q9H6D8 234 aaPredicted RBP10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 CR1LQ2VPA4 569 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 ZNF295-AS1Q8N0V1 137 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 LY96Q9Y6Y9 160 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 TRIOO75962 3097 aa10.6□□□□□ -0.71
PPP4R3B-206ENST00000616407 FAM106AQ4KMX7 169 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 LSM4Q9Y4Z0 139 aaKnown RBP10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 SAA4P35542 130 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 PLA2G5P39877 138 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 RPL15P61313 204 aaKnown RBP10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 ID1P41134 155 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 SPATA45Q537H7 98 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 CIARTQ8N365 385 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 TSKUQ8WUA8 353 aa10.59□□□□□ -0.71
PPP4R3B-206ENST00000616407 MGPP08493 103 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 ACTL10Q5JWF8 245 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 SPTBN4Q9H254 2564 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 GZMBP10144 247 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 ZNF562Q6V9R5 426 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 TMEM136Q6ZRR5 245 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 OR4B1Q8NGF8 309 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 A0A0C4DFX4 3053 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 TNRC6AQ8NDV7 1962 aaKnown RBP10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 CSPG4Q6UVK1 2322 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGHV2-70P01814 119 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 P0C879 139 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 DYSFO75923 2080 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 CGB3P0DN86 165 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 CGB7P0DN87 165 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 SSBP2P81877 361 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 VAMP3Q15836 100 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 ZNF329Q86UD4 541 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 ZFP30Q9Y2G7 519 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 DOPEY2Q9Y3R5 2298 aa10.58□□□□□ -0.72
PPP4R3B-206ENST00000616407 NPFFO15130 113 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 M0R3E3 92 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 TCTAP57738 103 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 TMEM116Q8NCL8 245 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 NRN1Q9NPD7 142 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 NCKAP5O14513 1909 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 PMCHL1Q16048 86 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 RITA1Q96K30 269 aa10.57□□□□□ -0.72
PPP4R3B-206ENST00000616407 HIST1H1AQ02539 215 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 GPX1P07203 203 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 SOX21Q9Y651 276 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 NOTCH2Q04721 2471 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 UQCRFS1P47985 274 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 C8orf31Q8N9H6 132 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 KCNS1Q96KK3 526 aa10.56□□□□□ -0.72
PPP4R3B-206ENST00000616407 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms