RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TTC9CQ8N5M4 171 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 CCL19Q99731 98 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 Q9H3A6 140 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 ZNF705GA8MUZ8 300 aaPredicted RBP10.73□□□□□ -0.69
NEK3-205ENST00000610828 SPINK4O60575 86 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 ADMP35318 185 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 YPEL3P61236 119 aaPredicted RBP10.73□□□□□ -0.69
NEK3-205ENST00000610828 Q8N9W7 124 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 RNF125Q96EQ8 232 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 C1RLQ9NZP8 487 aa10.73□□□□□ -0.69
NEK3-205ENST00000610828 IGHV7-81A0A0B4J1V7 117 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 TOMM40O96008 361 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 CA1P00915 261 aaPredicted RBP10.72□□□□□ -0.69
NEK3-205ENST00000610828 FRMD6-AS1P0C7T7 363 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 BRS3P32247 399 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 IER3P46695 156 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 MFAP4P55083 255 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 SLC35B1P78383 322 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 TMEM183BQ1AE95 376 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 PRR27Q6MZM9 219 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 ZNF491Q8N8L2 437 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 C5orf17Q8NAS9 161 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 FLNCQ14315 2725 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 Q56UQ5 140 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 ATG101Q9BSB4 218 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 THYN1Q9P016 225 aa10.72□□□□□ -0.69
NEK3-205ENST00000610828 CELSR1Q9NYQ6 3014 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 NPFFO15130 113 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 OR2J3O76001 311 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
NEK3-205ENST00000610828 FAM168AQ92567 244 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 SHANK2-AS3Q9BTD1 123 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 TMEM14CQ9P0S9 112 aa10.71□□□□□ -0.69
NEK3-205ENST00000610828 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 TRAV20A0A0B4J274 112 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 SNURFLB1AK76 121 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 AMBPP02760 352 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 EGR2P11161 476 aaPredicted RBP10.7□□□□□ -0.7
NEK3-205ENST00000610828 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 TMEM68Q96MH6 324 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 HSPB9Q9BQS6 159 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 PIMREGQ9BSJ6 248 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 MRPL18Q9H0U6 180 aaKnown RBP10.7□□□□□ -0.7
NEK3-205ENST00000610828 C21orf62Q9NYP8 219 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 NDUFB8O95169 186 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 TCRAP04437 139 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
NEK3-205ENST00000610828 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
NEK3-205ENST00000610828 IGHV3OR16-10A0A075B7F0 116 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 F8W735 103 aaPredicted RBP10.69□□□□□ -0.7
NEK3-205ENST00000610828 H3BRN7 92 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 FCGR2BP31994 310 aaPredicted RBP10.69□□□□□ -0.7
NEK3-205ENST00000610828 EXOC3-AS1Q8N2X6 119 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 GPR82Q96P67 336 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 CACNA1BQ00975 2339 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 IGHV4-61A0A0C4DH41 118 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 A0A1B0GUS0 222 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 GRIFINA4D1Z8 144 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 OR2T8A6NH00 312 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 GATCO43716 136 aaKnown RBP10.69□□□□□ -0.7
NEK3-205ENST00000610828 RNF224P0DH78 156 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 USF2Q15853 346 aaPredicted RBP10.69□□□□□ -0.7
NEK3-205ENST00000610828 ECSCRQ19T08 205 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 FAM231DQ6ZW35 169 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 NUDT10Q8NFP7 164 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 OR4F17Q8NGA8 305 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 NUDT11Q96G61 164 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 CRYBG3Q68DQ2 2970 aa10.69□□□□□ -0.7
NEK3-205ENST00000610828 DOPEY1Q5JWR5 2465 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 WI2-2373I1.2A0A1W2PRP0 233 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 MRPL54Q6P161 138 aaKnown RBP10.68□□□□□ -0.7
NEK3-205ENST00000610828 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
NEK3-205ENST00000610828 C17orf77Q96MU5 243 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 ZNF48Q96MX3 618 aaPredicted RBP10.68□□□□□ -0.7
NEK3-205ENST00000610828 ATP5J2P56134 94 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 RAB4BP61018 213 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 UNQ5815/PRO19632Q6UWF5 114 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 USP9XQ93008 2570 aaPredicted RBP10.68□□□□□ -0.7
NEK3-205ENST00000610828 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 ABCA2Q9BZC7 2435 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 NAT8BQ9UHF3 227 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
NEK3-205ENST00000610828 POLR3KQ9Y2Y1 108 aaPredicted RBP10.68□□□□□ -0.7
NEK3-205ENST00000610828 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 TRBV9A0A0B4J1U6 114 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 SH2D7A6NKC9 451 aaPredicted RBP10.67□□□□□ -0.7
NEK3-205ENST00000610828 ATP6V0E1O15342 81 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 PAX8Q06710 450 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 C9orf152Q5JTZ5 239 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms