RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 PSG1P11464 419 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 SUB1P53999 127 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNIP1-220ENST00000610535 SAPCD1Q5SSQ6 148 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 LDLRAD2Q5SZI1 272 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 OR4C13Q8NGP0 309 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 PERPQ96FX8 193 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 ZC2HC1AQ96GY0 325 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 GSX1Q9H4S2 264 aaPredicted RBP13.58□□□□□ -0.24
TNIP1-220ENST00000610535 ZNF835Q9Y2P0 537 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 INS-IGF2F8WCM5 200 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 COTL1Q14019 142 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 SLC25A34Q6PIV7 304 aa13.58□□□□□ -0.24
TNIP1-220ENST00000610535 CHCHD1Q96BP2 118 aaKnown RBP13.58□□□□□ -0.24
TNIP1-220ENST00000610535 TRAV17A0A0B4J275 112 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 IGLV2-23P01705 113 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 TMEM200BQ69YZ2 307 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 OR10X1Q8NGY0 326 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 DAZAP1Q96EP5 407 aaKnown RBP13.57□□□□□ -0.24
TNIP1-220ENST00000610535 APC2O95996 2303 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 PCNX1Q96RV3 2341 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 TRAV30A0A087WSZ9 112 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 A0A087X0K7 114 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 SNAI2O43623 268 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 LTAP01374 205 aa13.57□□□□□ -0.24
TNIP1-220ENST00000610535 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
TNIP1-220ENST00000610535 LOC102724200A0A096LPH7 203 aaPredicted RBP13.56□□□□□ -0.24
TNIP1-220ENST00000610535 TCRAP04437 139 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 RBPMS2Q6ZRY4 209 aaKnown RBP13.56□□□□□ -0.24
TNIP1-220ENST00000610535 Q9H3A6 140 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 CHEK1O14757 476 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 FOXE3Q13461 319 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 FAM162BQ5T6X4 162 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 STXBP6Q8NFX7 210 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 ASCL2Q99929 193 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 C1RLQ9NZP8 487 aa13.56□□□□□ -0.24
TNIP1-220ENST00000610535 HSBP1L1C9JCN9 74 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 C5orf17Q8NAS9 161 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 H1FXQ92522 213 aaKnown RBP13.55□□□□□ -0.24
TNIP1-220ENST00000610535 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 TMEM191AQ9H0A3 160 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 FMC1Q96HJ9 113 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 SELENOKQ9Y6D0 94 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
TNIP1-220ENST00000610535 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
TNIP1-220ENST00000610535 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
TNIP1-220ENST00000610535 GP9P14770 177 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 FAM27E3Q08E93 113 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 TMEM30BQ3MIR4 351 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 TEX36Q5VZQ5 186 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
TNIP1-220ENST00000610535 VPS25Q9BRG1 176 aa13.55□□□□□ -0.24
TNIP1-220ENST00000610535 PKDREJQ9NTG1 2253 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 BSNQ9UPA5 3926 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 ENSAO43768 121 aaKnown RBP13.54□□□□□ -0.24
TNIP1-220ENST00000610535 COL8A1P27658 744 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 SMIM12Q96EX1 92 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 NDFIP1Q9BT67 221 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 MAP1LC3CQ9BXW4 147 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 SCRT2Q9NQ03 307 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 RHOGP84095 191 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 CT83Q5H943 113 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 DEFB125Q8N687 156 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 ZNF492Q9P255 531 aa13.54□□□□□ -0.24
TNIP1-220ENST00000610535 LIPFP07098 398 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 IGFL2Q6UWQ7 119 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 EXOC3-AS1Q8N2X6 119 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 CST9LQ9H4G1 147 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 PRNTQ86SH4 94 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 PIP4P1Q86T03 277 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
TNIP1-220ENST00000610535 SOX21Q9Y651 276 aaPredicted RBP13.53□□□□□ -0.24
TNIP1-220ENST00000610535 CRYGCP07315 174 aa13.52□□□□□ -0.24
TNIP1-220ENST00000610535 TCTAP57738 103 aa13.52□□□□□ -0.24
TNIP1-220ENST00000610535 FAM215AQ9Y5M1 114 aa13.52□□□□□ -0.24
TNIP1-220ENST00000610535 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.52□□□□□ -0.25
TNIP1-220ENST00000610535 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
TNIP1-220ENST00000610535 LYPD2Q6UXB3 125 aa13.52□□□□□ -0.25
TNIP1-220ENST00000610535 ARL6IP6Q8N6S5 226 aa13.52□□□□□ -0.25
TNIP1-220ENST00000610535 NEU4Q8WWR8 484 aaPredicted RBP13.52□□□□□ -0.25
TNIP1-220ENST00000610535 GFRA4Q9GZZ7 299 aa13.52□□□□□ -0.25
TNIP1-220ENST00000610535 HTR1DP28221 377 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 PET117Q6UWS5 81 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 GOLT1AQ6ZVE7 132 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 TRGV9Q99603 122 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 ZZEF1O43149 2961 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 TACC2O95359 2948 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 NBASA2RRP1 2371 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 ZNF785A8K8V0 405 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 CD40P25942 277 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 CNTFRP26992 372 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 PSG9Q00887 426 aa13.51□□□□□ -0.25
TNIP1-220ENST00000610535 PRB3Q04118 309 aaPredicted RBP13.51□□□□□ -0.25
TNIP1-220ENST00000610535 MEF2CQ06413 473 aaPredicted RBP13.51□□□□□ -0.25
TNIP1-220ENST00000610535 VMA21Q3ZAQ7 101 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms