RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 TGFAP01135 160 aa17.27■□□□□ 0.36
SH3D19-211ENST00000604030 E9PQ18 207 aa17.27■□□□□ 0.35
SH3D19-211ENST00000604030 OVOL2Q9BRP0 275 aa17.27■□□□□ 0.35
SH3D19-211ENST00000604030 GGTLC3B5MD39 225 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 VCYO14598 125 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 ZNF664Q8N3J9 261 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 PGPEP1Q9NXJ5 209 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 A6NNC1 897 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 RALGAPA1Q6GYQ0 2036 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 DSCR9P59020 149 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 GAGE2BQ13066 116 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 GAGE2EQ4V326 116 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 CRIM1Q9NZV1 1036 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 GAGE2DQ9UEU5 116 aa17.26■□□□□ 0.35
SH3D19-211ENST00000604030 DLX4Q92988 240 aaPredicted RBP17.26■□□□□ 0.35
SH3D19-211ENST00000604030 NCOR1P1Q9H4R4 102 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 ETV2O00321 342 aaPredicted RBP17.25■□□□□ 0.35
SH3D19-211ENST00000604030 NDUFS6O75380 124 aaKnown RBP17.25■□□□□ 0.35
SH3D19-211ENST00000604030 FOXG1P55316 489 aaPredicted RBP17.25■□□□□ 0.35
SH3D19-211ENST00000604030 FHL1Q13642 323 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 RFNGQ9Y644 331 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 ASXL3Q9C0F0 2248 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 LINC00473A8K010 186 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 CD300EQ496F6 205 aaPredicted RBP17.25■□□□□ 0.35
SH3D19-211ENST00000604030 TFF1P04155 84 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 RNASE2P10153 161 aaKnown RBP17.25■□□□□ 0.35
SH3D19-211ENST00000604030 C10orf55Q5SWW7 151 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 DTX1Q86Y01 620 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 C11orf68Q9H3H3 251 aaKnown RBP17.25■□□□□ 0.35
SH3D19-211ENST00000604030 APC2O95996 2303 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 DOCK6Q96HP0 2047 aa17.25■□□□□ 0.35
SH3D19-211ENST00000604030 SH2D1AO60880 128 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 ZFAND6Q6FIF0 208 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 EXOC3-AS1Q8N2X6 119 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 SIP14410 1827 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 MLNRO43193 412 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 TDGF1P3P51864 188 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 IGKV2-40A0A087WW87 121 aaPredicted RBP17.24■□□□□ 0.35
SH3D19-211ENST00000604030 IGKV2D-40P01614 121 aaPredicted RBP17.24■□□□□ 0.35
SH3D19-211ENST00000604030 PPIFP30405 207 aaKnown RBP17.24■□□□□ 0.35
SH3D19-211ENST00000604030 GTSCR1Q86UQ5 136 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 NDUFS8O00217 210 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 MALP21145 153 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 B3GALT5-AS1P59052 145 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 C5orf64Q2M2E5 130 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 ZNF329Q86UD4 541 aa17.24■□□□□ 0.35
SH3D19-211ENST00000604030 PFN1P07737 140 aaKnown RBP17.23■□□□□ 0.35
SH3D19-211ENST00000604030 C15orf32Q32M92 178 aa17.23■□□□□ 0.35
SH3D19-211ENST00000604030 ZNF672Q499Z4 452 aaPredicted RBP17.23■□□□□ 0.35
SH3D19-211ENST00000604030 C10orf91Q5T1B1 145 aa17.23■□□□□ 0.35
SH3D19-211ENST00000604030 GAFA1Q96PS6 74 aa17.23■□□□□ 0.35
SH3D19-211ENST00000604030 TRAV3A0A0B4J244 114 aa17.23■□□□□ 0.35
SH3D19-211ENST00000604030 MPV17L2Q567V2 206 aa17.23■□□□□ 0.35
SH3D19-211ENST00000604030 DTX2Q86UW9 622 aa17.23■□□□□ 0.35
SH3D19-211ENST00000604030 Q86TA4 180 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 MDS2Q8NDY4 140 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 A8MWP6 167 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 GLMPQ8WWB7 406 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 RIPPLY3P57055 190 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 SIGLEC9Q9Y336 463 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 FREM3P0C091 2139 aa17.22■□□□□ 0.35
SH3D19-211ENST00000604030 USMG5Q96IX5 58 aa17.21■□□□□ 0.35
SH3D19-211ENST00000604030 S100A7L2Q5SY68 101 aa17.21■□□□□ 0.35
SH3D19-211ENST00000604030 RASL10AQ92737 203 aa17.21■□□□□ 0.35
SH3D19-211ENST00000604030 MBD3L4A6NDZ8 208 aaPredicted RBP17.21■□□□□ 0.35
SH3D19-211ENST00000604030 MBD3L3A6NE82 208 aaPredicted RBP17.21■□□□□ 0.35
SH3D19-211ENST00000604030 MBD3L5A6NJ08 208 aaPredicted RBP17.21■□□□□ 0.35
SH3D19-211ENST00000604030 ADARB2-AS1A8MUL3 147 aa17.21■□□□□ 0.35
SH3D19-211ENST00000604030 ESDP10768 282 aa17.21■□□□□ 0.35
SH3D19-211ENST00000604030 MBD3L2Q8NHZ7 208 aaPredicted RBP17.21■□□□□ 0.35
SH3D19-211ENST00000604030 A0A0G2JRQ6 117 aa17.21■□□□□ 0.34
SH3D19-211ENST00000604030 TMEM8BA6NDV4 472 aa17.21■□□□□ 0.34
SH3D19-211ENST00000604030 CDKN1AP38936 164 aa17.21■□□□□ 0.34
SH3D19-211ENST00000604030 SMAD7O15105 426 aaKnown RBP17.2■□□□□ 0.34
SH3D19-211ENST00000604030 NCR2O95944 276 aa17.2■□□□□ 0.34
SH3D19-211ENST00000604030 IGHG3P01860 377 aa17.2■□□□□ 0.34
SH3D19-211ENST00000604030 CRPP02741 224 aa17.2■□□□□ 0.34
SH3D19-211ENST00000604030 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
SH3D19-211ENST00000604030 hDV102S1A0JD36 115 aa17.2■□□□□ 0.34
SH3D19-211ENST00000604030 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 C5orf63A6NC05 138 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 Q6ZRM9 215 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 SHANK2-AS3Q9BTD1 123 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 FAM223BA6NKX1 122 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 LMO1P25800 156 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 EFNA4P52798 201 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 FAM223AQ8IWN6 122 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 KIR3DS1Q14943 382 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 TEX43Q6ZNM6 134 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 VMO1Q7Z5L0 202 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 TRGV4A0A0C4DH28 118 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 BUB1B-PAK6H3BSN5 160 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 LCN12Q6JVE5 192 aa17.19■□□□□ 0.34
SH3D19-211ENST00000604030 CKS1BP61024 79 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 COX11Q9Y6N1 276 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 LGALS1P09382 135 aaKnown RBP17.18■□□□□ 0.34
SH3D19-211ENST00000604030 SSBP2P81877 361 aaPredicted RBP17.18■□□□□ 0.34
SH3D19-211ENST00000604030 TMEM75Q8N9X5 138 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 IGKV1D-17A0A075B6S4 117 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms