RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 CIARTQ8N365 385 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 RITA1Q96K30 269 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 PMCHL2Q9BQD1 86 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 GSX1Q9H4S2 264 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 ZNF492Q9P255 531 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 TRAV30A0A087WSZ9 112 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 GFRA4Q9GZZ7 299 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 C1RLQ9NZP8 487 aa13.93□□□□□ -0.18
ARHGEF1-213ENST00000595897 MUC21A0A0G2JKD1 596 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 MUC21A0A140T8X8 626 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 CBY3A6NI87 242 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 GP9P14770 177 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 MUC21Q5SSG8 566 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 BVES-AS1Q5T3Y7 98 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 C12orf54Q6X4T0 127 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 PRNTQ86SH4 94 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 CCL17Q92583 94 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 TRGV9Q99603 122 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 RNF24Q9Y225 148 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 PKDREJQ9NTG1 2253 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 OR5AL1P0C617 328 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 NDFIP1Q9BT67 221 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 HSPB8Q9UJY1 196 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 FAM215AQ9Y5M1 114 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 SMG1Q96Q15 3661 aaKnown RBP13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 LYZP61626 148 aa13.92□□□□□ -0.18
ARHGEF1-213ENST00000595897 C3orf36Q3SXR2 165 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 GOLT1AQ6ZVE7 132 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 ZADH2Q8N4Q0 377 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 C8orf46Q8TAG6 207 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 TAX1BP3O14907 124 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 NDUFB3O43676 98 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 CDKN1BP46527 198 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 PET117Q6UWS5 81 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 TMUB1Q9BVT8 246 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 HIGD1AQ9Y241 93 aa13.91□□□□□ -0.18
ARHGEF1-213ENST00000595897 TPRP12270 2363 aaKnown RBP13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 PPIAL4EA0A075B759 164 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 OR2T8A6NH00 312 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 PPIAL4DF5H284 164 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 PPIAL4FP0DN26 164 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 MC5RP33032 325 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 CNOT1A5YKK6 2376 aaKnown RBP13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 Q86TA4 180 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 EXOC3-AS1Q8N2X6 119 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 TMEM116Q8NCL8 245 aa13.9□□□□□ -0.18
ARHGEF1-213ENST00000595897 FAM231BA6NCW3 169 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 HLA-DRB1P01911 266 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 CRYGCP07315 174 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 SAPCD1Q5SSQ6 148 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 A0A087X0K7 114 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 FCN3O75636 299 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 LGALS7P47929 136 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 DEFB125Q8N687 156 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 SCRT2Q9NQ03 307 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 C17orf100A8MU93 164 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 FAM71F2Q6NXP2 309 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 LYPD2Q6UXB3 125 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 TMEM108Q6UXF1 575 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 DCHS1Q96JQ0 3298 aa13.89□□□□□ -0.19
ARHGEF1-213ENST00000595897 C1orf185Q5T7R7 199 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 SRSF12Q8WXF0 261 aaKnown RBP13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 OTORQ9NRC9 128 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 AP5S1Q9NUS5 200 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 A0A1B0GUT8 65 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 HAX1O00165 279 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 PRB4P10163 310 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 AMMECR1LQ6DCA0 310 aa13.88□□□□□ -0.19
ARHGEF1-213ENST00000595897 PSG1P11464 419 aa13.87□□□□□ -0.19
ARHGEF1-213ENST00000595897 WFDC8Q8IUA0 241 aa13.87□□□□□ -0.19
ARHGEF1-213ENST00000595897 SNAI2O43623 268 aa13.87□□□□□ -0.19
ARHGEF1-213ENST00000595897 APOHP02749 345 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF1-213ENST00000595897 COTL1Q14019 142 aa13.87□□□□□ -0.19
ARHGEF1-213ENST00000595897 LINC00311Q8N616 119 aa13.87□□□□□ -0.19
ARHGEF1-213ENST00000595897 NPIPB6E9PJ23 425 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 CNTFRP26992 372 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 Q71RC1 249 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 PRSS3P2Q8NHM4 247 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 ASCL2Q99929 193 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 MS4A6AQ9H2W1 248 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 RBP4P02753 201 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 ARMS2P0C7Q2 107 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 RHOGP84095 191 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 HIST1H1AQ02539 215 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 FA2HQ7L5A8 372 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 NEU4Q8WWR8 484 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 VPS25Q9BRG1 176 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 SLC25A39Q9BZJ4 359 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 BDP1A6H8Y1 2624 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 TMEM178BH3BS89 294 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 ARF6P62330 175 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 ADIPOQQ15848 244 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 MRGPRG-AS1Q2M3A8 158 aa13.86□□□□□ -0.19
ARHGEF1-213ENST00000595897 NUP37Q8NFH4 326 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms