RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 LOC102723971A0A1B0GUV8 181 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 C9JQL5 133 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 IFNA1P01562 189 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 GCHFRP30047 84 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 KIAA0141Q14154 515 aaPredicted RBP16.08■□□□□ 0.16
PNKP-203ENST00000593946 ICAM4Q14773 271 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 USF2Q15853 346 aaPredicted RBP16.08■□□□□ 0.16
PNKP-203ENST00000593946 RNF152Q8N8N0 203 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 MYOZ3Q8TDC0 251 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 SMDT1Q9H4I9 107 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 MANBALQ9NQG1 85 aa16.08■□□□□ 0.16
PNKP-203ENST00000593946 TRAV5A0A0B4J249 113 aa16.07■□□□□ 0.16
PNKP-203ENST00000593946 IGHV3-11P01762 117 aa16.07■□□□□ 0.16
PNKP-203ENST00000593946 OR5AU1Q8NGC0 362 aa16.07■□□□□ 0.16
PNKP-203ENST00000593946 JMJD8Q96S16 334 aa16.07■□□□□ 0.16
PNKP-203ENST00000593946 SLC25A39Q9BZJ4 359 aaPredicted RBP16.07■□□□□ 0.16
PNKP-203ENST00000593946 PPP5D1E7EU14 171 aa16.06■□□□□ 0.16
PNKP-203ENST00000593946 OR7C2O60412 319 aa16.06■□□□□ 0.16
PNKP-203ENST00000593946 PPT1P50897 306 aa16.06■□□□□ 0.16
PNKP-203ENST00000593946 NARS2Q96I59 477 aaKnown RBP16.06■□□□□ 0.16
PNKP-203ENST00000593946 GNB4Q9HAV0 340 aa16.06■□□□□ 0.16
PNKP-203ENST00000593946 TMEM218A2RU14 115 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 KRBOX1C9JBD0 128 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 TRBV12-3P01733 135 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 CRYBA1P05813 215 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 ARL3P36405 182 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 RELQ04864 619 aaPredicted RBP16.05■□□□□ 0.16
PNKP-203ENST00000593946 OR4X2Q8NGF9 303 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 LINC00052Q96N35 136 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 ZFAND3Q9H8U3 227 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 IGHV3-35A0A0C4DH35 117 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 RPLP1P05386 114 aaKnown RBP16.05■□□□□ 0.16
PNKP-203ENST00000593946 ZP3P21754 424 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 TAGLN2P37802 199 aaKnown RBP16.05■□□□□ 0.16
PNKP-203ENST00000593946 TOMM20LQ6UXN7 152 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 SHANK2-AS3Q9BTD1 123 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 VAX2Q9UIW0 290 aa16.05■□□□□ 0.16
PNKP-203ENST00000593946 CYSRT1A8MQ03 144 aa16.04■□□□□ 0.16
PNKP-203ENST00000593946 H3BRN7 92 aa16.04■□□□□ 0.16
PNKP-203ENST00000593946 HSPB1P04792 205 aaKnown RBP16.04■□□□□ 0.16
PNKP-203ENST00000593946 KLHDC1Q8N7A1 406 aa16.04■□□□□ 0.16
PNKP-203ENST00000593946 SUN5Q8TC36 379 aa16.04■□□□□ 0.16
PNKP-203ENST00000593946 RXFP4Q8TDU9 374 aa16.04■□□□□ 0.16
PNKP-203ENST00000593946 CRLF1O75462 422 aa16.03■□□□□ 0.16
PNKP-203ENST00000593946 FAM209BQ5JX69 171 aa16.03■□□□□ 0.16
PNKP-203ENST00000593946 STXBP6Q8NFX7 210 aa16.03■□□□□ 0.16
PNKP-203ENST00000593946 C16orf95Q9H693 158 aa16.03■□□□□ 0.16
PNKP-203ENST00000593946 TMEM167BQ9NRX6 74 aa16.03■□□□□ 0.16
PNKP-203ENST00000593946 BMPR1BO00238 502 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 PAGE4O60829 102 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 OR10J4P0C629 311 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 SFTA3P0C7M3 94 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 MEF2BQ02080 365 aaPredicted RBP16.02■□□□□ 0.16
PNKP-203ENST00000593946 LEMD1Q68G75 181 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 S100A7AQ86SG5 101 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 PAXXQ9BUH6 204 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 OR51M1Q9H341 326 aa16.02■□□□□ 0.16
PNKP-203ENST00000593946 PYYP10082 97 aa16.02■□□□□ 0.15
PNKP-203ENST00000593946 SLC35B3Q9H1N7 401 aa16.02■□□□□ 0.15
PNKP-203ENST00000593946 SRP19P09132 144 aaKnown RBP16.01■□□□□ 0.15
PNKP-203ENST00000593946 GP9P14770 177 aa16.01■□□□□ 0.15
PNKP-203ENST00000593946 ADCYAP1P18509 176 aa16.01■□□□□ 0.15
PNKP-203ENST00000593946 UBE2G2P60604 165 aa16.01■□□□□ 0.15
PNKP-203ENST00000593946 UBE2L3P68036 154 aaKnown RBP16.01■□□□□ 0.15
PNKP-203ENST00000593946 WIPF2Q8TF74 440 aaPredicted RBP16.01■□□□□ 0.15
PNKP-203ENST00000593946 UBE2E2Q96LR5 201 aa16.01■□□□□ 0.15
PNKP-203ENST00000593946 PEF1Q9UBV8 284 aaKnown RBP16.01■□□□□ 0.15
PNKP-203ENST00000593946 RABAC1Q9UI14 185 aa16.01■□□□□ 0.15
PNKP-203ENST00000593946 ARL2-SNX15V9GYD0 113 aa16.01■□□□□ 0.15
PNKP-203ENST00000593946 ZNF98A6NK75 572 aa16■□□□□ 0.15
PNKP-203ENST00000593946 CD81P60033 236 aa16■□□□□ 0.15
PNKP-203ENST00000593946 FXYD5Q96DB9 178 aa16■□□□□ 0.15
PNKP-203ENST00000593946 SETD2Q9BYW2 2564 aaPredicted RBP16■□□□□ 0.15
PNKP-203ENST00000593946 IGHV3OR16-8A0A075B7F1 116 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 CLPSL1A2RUU4 121 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 NDUFS6O75380 124 aaKnown RBP15.99■□□□□ 0.15
PNKP-203ENST00000593946 OR5B12Q96R08 314 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 TMEM14CQ9P0S9 112 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 YTHDF2Q9Y5A9 579 aaKnown RBP15.99■□□□□ 0.15
PNKP-203ENST00000593946 FAM74A7A6NL05 159 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 NDUFA4O00483 81 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 TCF21O43680 179 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 GGCTO75223 188 aaKnown RBP15.99■□□□□ 0.15
PNKP-203ENST00000593946 C10orf91Q5T1B1 145 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 LINC01006Q8NI28 216 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 SEC11CQ9BY50 192 aa15.99■□□□□ 0.15
PNKP-203ENST00000593946 C11orf94C9JXX5 98 aa15.98■□□□□ 0.15
PNKP-203ENST00000593946 NDUFA7O95182 113 aa15.98■□□□□ 0.15
PNKP-203ENST00000593946 LGALS1P09382 135 aaKnown RBP15.98■□□□□ 0.15
PNKP-203ENST00000593946 TCTEX1D4Q5JR98 221 aa15.98■□□□□ 0.15
PNKP-203ENST00000593946 CST9LP1Q5W188 147 aa15.98■□□□□ 0.15
PNKP-203ENST00000593946 CYB561D1Q8N8Q1 229 aa15.98■□□□□ 0.15
PNKP-203ENST00000593946 TXNDC17Q9BRA2 123 aa15.98■□□□□ 0.15
PNKP-203ENST00000593946 F8W036 122 aa15.97■□□□□ 0.15
PNKP-203ENST00000593946 S100A7P31151 101 aa15.97■□□□□ 0.15
PNKP-203ENST00000593946 ATP5G3P48201 142 aa15.97■□□□□ 0.15
PNKP-203ENST00000593946 BPIFA4PQ86YQ2 179 aa15.97■□□□□ 0.15
PNKP-203ENST00000593946 OR4F5Q8NH21 305 aa15.97■□□□□ 0.15
PNKP-203ENST00000593946 OR4F4Q96R69 305 aa15.97■□□□□ 0.15
PNKP-203ENST00000593946 RNF24Q9Y225 148 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms