RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 NDUFB6O95139 128 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 PSG1P11464 419 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 GAMTQ14353 236 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 USF2Q15853 346 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-210ENST00000590541 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 CSNK1G2-AS1Q8NCQ2 148 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 DCANP1Q8TF63 244 aa12.44□□□□□ -0.42
RETREG3-210ENST00000590541 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
RETREG3-210ENST00000590541 BUB3O43684 328 aa12.43□□□□□ -0.42
RETREG3-210ENST00000590541 SYNGR2O43760 224 aa12.43□□□□□ -0.42
RETREG3-210ENST00000590541 SPP1P10451 314 aa12.43□□□□□ -0.42
RETREG3-210ENST00000590541 MORN3Q6PF18 240 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-210ENST00000590541 RNF125Q96EQ8 232 aa12.43□□□□□ -0.42
RETREG3-210ENST00000590541 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
RETREG3-210ENST00000590541 AGRNO00468 2067 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 HERC1Q15751 4861 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 CDK2AP2O75956 126 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 CFDP00746 253 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-210ENST00000590541 SNRPD3P62318 126 aaKnown RBP12.42□□□□□ -0.42
RETREG3-210ENST00000590541 DHRS2Q13268 280 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 BAK1Q16611 211 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 MAPKAPK5-AS1Q8N8E1 139 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 COQ8AQ8NI60 647 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 TBC1D24Q9ULP9 559 aa12.42□□□□□ -0.42
RETREG3-210ENST00000590541 C9orf170A2RU37 121 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 SNRPGP15A8MWD9 76 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 HOXB5P09067 269 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 GGNBP1Q5YKI7 109 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 SIGLEC15Q6ZMC9 328 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 TRGV9Q99603 122 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 NRN1Q9NPD7 142 aa12.41□□□□□ -0.42
RETREG3-210ENST00000590541 KNCNA6PVL3 124 aa12.4□□□□□ -0.42
RETREG3-210ENST00000590541 IFNA21P01568 189 aa12.4□□□□□ -0.42
RETREG3-210ENST00000590541 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
RETREG3-210ENST00000590541 IAPPP10997 89 aa12.4□□□□□ -0.42
RETREG3-210ENST00000590541 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
RETREG3-210ENST00000590541 IGKV1D-37A0A075B6S9 117 aa12.39□□□□□ -0.43
RETREG3-210ENST00000590541 OR4E1P0C645 316 aa12.39□□□□□ -0.43
RETREG3-210ENST00000590541 S100A7P31151 101 aa12.39□□□□□ -0.43
RETREG3-210ENST00000590541 ID3Q02535 119 aa12.39□□□□□ -0.43
RETREG3-210ENST00000590541 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
RETREG3-210ENST00000590541 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
RETREG3-210ENST00000590541 PAIP2BQ9ULR5 123 aaKnown RBP12.39□□□□□ -0.43
RETREG3-210ENST00000590541 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
RETREG3-210ENST00000590541 WRBO00258 174 aa12.38□□□□□ -0.43
RETREG3-210ENST00000590541 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
RETREG3-210ENST00000590541 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
RETREG3-210ENST00000590541 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-210ENST00000590541 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
RETREG3-210ENST00000590541 SLC45A2Q9UMX9 530 aa12.38□□□□□ -0.43
RETREG3-210ENST00000590541 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
RETREG3-210ENST00000590541 C16orf90A8MZG2 172 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 IL7P13232 177 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 ZNF90Q03938 601 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 SPANXN5Q5MJ07 72 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 C1orf134Q5TEV5 83 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
RETREG3-210ENST00000590541 PRSS46E5RG02 174 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 ID1P41134 155 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 NKX2-1P43699 371 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-210ENST00000590541 LYZP61626 148 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 C4orf46Q504U0 113 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 Q8N1X5 172 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 C1QTNF4Q9BXJ3 329 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 FLVCR2Q9UPI3 526 aa12.36□□□□□ -0.43
RETREG3-210ENST00000590541 ADAP1O75689 374 aa12.35□□□□□ -0.43
RETREG3-210ENST00000590541 BTCP35070 178 aa12.35□□□□□ -0.43
RETREG3-210ENST00000590541 LINC00299Q6ZSB3 139 aa12.35□□□□□ -0.43
RETREG3-210ENST00000590541 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
RETREG3-210ENST00000590541 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
RETREG3-210ENST00000590541 DNAH5Q8TE73 4624 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 IGKV1OR2-108A0A075B7D4 117 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 LINC00854A0A1B0GVQ3 168 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 MEOX2P50222 304 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 TNP2Q05952 138 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 TMEM144Q7Z5S9 345 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 BPIFCQ8NFQ6 507 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
RETREG3-210ENST00000590541 ANXA7P20073 488 aaKnown RBP12.33□□□□□ -0.44
RETREG3-210ENST00000590541 PSMB3P49720 205 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 TAS2R30P59541 319 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 AKR1C1Q04828 323 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 OR2F1Q13607 317 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 RNF212Q495C1 297 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 SPATA31B1PQ5VZV4 182 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 OR8I2Q8N0Y5 310 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 MITD1Q8WV92 249 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 FAM210BQ96KR6 192 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 GPR82Q96P67 336 aa12.33□□□□□ -0.44
RETREG3-210ENST00000590541 FNDC10F2Z333 226 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 H3BMM0 161 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 LYRM1O43325 122 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms