RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
LINC01538-201ENST00000588074 HLA-DRB4X5D2U9 266 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 SCN2AQ99250 2005 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 NUP210Q8TEM1 1887 aaPredicted RBP4.48□□□□□ -1.69
LINC01538-201ENST00000588074 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 SMIM27A0A1W2PRY6 76 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 TCRBV4S1A1TA0A5B7 111 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 NDUFB2O95178 105 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 SLC25A14O95258 325 aaPredicted RBP4.48□□□□□ -1.69
LINC01538-201ENST00000588074 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 RPL30P62888 115 aaKnown RBP4.48□□□□□ -1.69
LINC01538-201ENST00000588074 SRYQ05066 204 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 LINC01590Q5TEZ4 76 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 PRIMA1Q86XR5 153 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 CIARTQ8N365 385 aaPredicted RBP4.48□□□□□ -1.69
LINC01538-201ENST00000588074 SLC22A24Q8N4F4 322 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 C3orf56Q8N813 242 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 FGF14Q92915 247 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 CHCHD5Q9BSY4 110 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 PAPPA2Q9BXP8 1791 aa4.48□□□□□ -1.69
LINC01538-201ENST00000588074 LY6LH3BQJ8 138 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 J3QQQ9 107 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 PDCD6O75340 191 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 TRACP01848 142 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 IGF1P05019 195 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 ASAH2BP0C7U1 165 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 MED14OSP0DP75 135 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 MGST1P10620 155 aaKnown RBP4.47□□□□□ -1.69
LINC01538-201ENST00000588074 EBI3Q14213 229 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 C12orf74Q32Q52 190 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 LGALS9BQ3B8N2 356 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 LGALS9CQ6DKI2 356 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 ABHD12Q8N2K0 398 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 C15orf53Q8NAA6 179 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 FAM60AQ9NP50 221 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 NUMA1Q14980 2115 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 SCN5AQ14524 2016 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 CENPFP49454 3210 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 TRBV20OR9-2A0A075B6H5 130 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 RBAKDNA6NC62 111 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 K7ERJ3 54 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 APOHP02749 345 aaPredicted RBP4.47□□□□□ -1.69
LINC01538-201ENST00000588074 FRMD6-AS1P0C7T7 363 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 SCGB1C2P0DMR2 95 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 CXCL8P10145 99 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 COX7CP15954 63 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 COX5AP20674 150 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 PFN2P35080 140 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 ARFRP1Q13795 201 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 MRPL2Q5T653 305 aaKnown RBP4.47□□□□□ -1.69
LINC01538-201ENST00000588074 SLC48A1Q6P1K1 146 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 ZNF793Q6ZN11 406 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 Q6ZQT7 251 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 LINC01561Q8N1V8 128 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 EXOC3-AS1Q8N2X6 119 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 PFN4Q8NHR9 129 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 TAF15Q92804 592 aaKnown RBP eCLIP4.47□□□□□ -1.69
LINC01538-201ENST00000588074 KLK6Q92876 244 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 C11orf52Q96A22 123 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 CHAC1Q9BUX1 264 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 STARD5Q9NSY2 213 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 TCF19Q9Y242 345 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 MYO16Q9Y6X6 1858 aa4.47□□□□□ -1.69
LINC01538-201ENST00000588074 BRCA2P51587 3418 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 TRAV27A0A087WT01 109 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 SMIM28A0A1B0GU29 152 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 A0A1B0GVT2 93 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 LYPD3O95274 346 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 LGALS1P09382 135 aaKnown RBP4.46□□□□□ -1.69
LINC01538-201ENST00000588074 SSR4P51571 173 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 FAM231DQ6ZW35 169 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 ATP5L2Q7Z4Y8 100 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 RPS19BP1Q86WX3 136 aaKnown RBP4.46□□□□□ -1.69
LINC01538-201ENST00000588074 FAM57AQ8TBR7 257 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 PLA2G2FQ9BZM2 168 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 IL36RNQ9UBH0 155 aa4.46□□□□□ -1.69
LINC01538-201ENST00000588074 TRAV2A0A0B4J234 112 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 TRAV8-2A0A0B4J237 113 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 LINC01619G3V211 115 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 NDUFC2O95298 119 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 RENP00797 406 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 PIRTP0C851 137 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 PSMB8P28062 276 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 HLA-DMBP28068 263 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 SSR2P43308 183 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
LINC01538-201ENST00000588074 CD164Q04900 197 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 PRDX1Q06830 199 aaKnown RBP4.46□□□□□ -1.7
LINC01538-201ENST00000588074 ZNF672Q499Z4 452 aaPredicted RBP4.46□□□□□ -1.7
LINC01538-201ENST00000588074 Q71RC1 249 aaPredicted RBP4.46□□□□□ -1.7
LINC01538-201ENST00000588074 RAB42Q8N4Z0 105 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 MAPKAPK5-AS1Q8N8E1 139 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 LINC01600Q96MT4 127 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 ODF3Q96PU9 254 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 FAM173AQ9BQD7 235 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 SLC25A22Q9H936 323 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms