RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FAM90A2PQ658T7 463 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 CBLN2Q8IUK8 224 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 C15orf54Q8N8G6 183 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 NECAP1Q8NC96 275 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 OR5R1Q8NH85 324 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 ZNF48Q96MX3 618 aaPredicted RBP7.3□□□□□ -1.24
SS18-220ENST00000582092 MS4A10Q96PG2 267 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 MDFIQ99750 246 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 HSPB9Q9BQS6 159 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 CTDSP1Q9GZU7 261 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 S4R3C0 116 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 ATRQ13535 2644 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 TRBV7-1A0A0A6YYK4 115 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 MDFIC2A0A1B0GVS7 189 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 A6NDX4 124 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 HELTA6NFD8 242 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 SH2D7A6NKC9 451 aaPredicted RBP7.29□□□□□ -1.24
SS18-220ENST00000582092 AP4M1O00189 453 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 PLXNB1O43157 2135 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 IL4P05112 153 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 NDPQ00604 133 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 C15orf32Q32M92 178 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 FBLN7Q53RD9 439 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 ASPHD1Q5U4P2 390 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 PATE2Q6UY27 113 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 BPIFA4PQ86YQ2 179 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 OR4F17Q8NGA8 305 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 RNF125Q96EQ8 232 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 FANCD2OSQ96PS1 177 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 SLC25A2Q9BXI2 301 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 TUBA4BQ9H853 241 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 MLXQ9UH92 298 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 YTHDF2Q9Y5A9 579 aaKnown RBP7.29□□□□□ -1.24
SS18-220ENST00000582092 DMRT1Q9Y5R6 373 aa7.29□□□□□ -1.24
SS18-220ENST00000582092 CXorf65A6NEN9 183 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 OR2T8A6NH00 312 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 FAM223BA6NKX1 122 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 G3V318 75 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 CLDN34H7C241 214 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 BMPR1BO00238 502 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 PPP1R2P9O14990 202 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 AVPP01185 164 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 IGHV3-23P01764 117 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 TRGV3P03979 118 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 SLC25A5P05141 298 aaKnown RBP7.28□□□□□ -1.24
SS18-220ENST00000582092 NBEAP1P0C6P0 100 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 EGR2P11161 476 aaPredicted RBP7.28□□□□□ -1.24
SS18-220ENST00000582092 FCGR2BP31994 310 aaPredicted RBP7.28□□□□□ -1.24
SS18-220ENST00000582092 CNN1P51911 297 aaKnown RBP7.28□□□□□ -1.24
SS18-220ENST00000582092 RELQ04864 619 aaPredicted RBP7.28□□□□□ -1.24
SS18-220ENST00000582092 DEFB112Q30KQ8 113 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 FAM223AQ8IWN6 122 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 CMTM2Q8TAZ6 248 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 SLC25A39Q9BZJ4 359 aaPredicted RBP7.28□□□□□ -1.24
SS18-220ENST00000582092 RABAC1Q9UI14 185 aa7.28□□□□□ -1.24
SS18-220ENST00000582092 A0A0G2JLM5 398 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 PSMB11A5LHX3 300 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 C1orf196B1AJZ1 125 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 H7BYZ3 331 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 IGKV1-17P01599 117 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 CLEC3BP05452 202 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 PYYP10082 97 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 CRYBB3P26998 211 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 GNG4P50150 75 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 RAB9AP51151 201 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 UBE2G1P62253 170 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
SS18-220ENST00000582092 KCNIP4Q6PIL6 250 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 CLEC19AQ6UXS0 136 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 ZNF600Q6ZNG1 722 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 PIFOQ8TCI5 191 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 TMEM190Q8WZ59 177 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 USMG5Q96IX5 58 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 FAM167A-AS1Q96KT0 104 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 TCEAL7Q9BRU2 100 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 COL6A5A8TX70 2615 aa7.27□□□□□ -1.25
SS18-220ENST00000582092 WI2-2373I1.2A0A1W2PRP0 233 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 PGPA6NDG6 321 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 LINC01548A6NM66 108 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 H3BUA1 57 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 K7EQM0 130 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 IGHG2P01859 326 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 S100A9P06702 114 aaKnown RBP7.26□□□□□ -1.25
SS18-220ENST00000582092 HIST1H1EP10412 219 aaKnown RBP7.26□□□□□ -1.25
SS18-220ENST00000582092 PF4V1P10720 104 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 GPR183P32249 361 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 TPPP2P59282 170 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 HILS1P60008 231 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 RAB5BP61020 215 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
SS18-220ENST00000582092 RPL19P84098 196 aaKnown RBP7.26□□□□□ -1.25
SS18-220ENST00000582092 KRTAP24-1Q3LI83 254 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 RNF212Q495C1 297 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 FAM24BQ8N5W8 94 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 ZNF491Q8N8L2 437 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 HIST1H2BAQ96A08 127 aa7.26□□□□□ -1.25
SS18-220ENST00000582092 BTF3L4Q96K17 158 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms