RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 M0R381 172 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 RNASE2P10153 161 aaKnown RBP10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 CDKN1BP46527 198 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 ZFP36L1Q07352 338 aaKnown RBP10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 HTN1P15515 57 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 SPTBN2O15020 2390 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 CACNA1GO43497 2377 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 TGFAP01135 160 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 TMEM249Q2WGJ8 235 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 HOXA3O43365 443 aaPredicted RBP10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 PVRIGQ6DKI7 326 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 GTSCR1Q86UQ5 136 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 Q8NFD4 153 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 FDCSPQ8NFU4 85 aa10.73□□□□□ -0.69
PCDHGB3-201ENST00000576222 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 IGHV3-23P01764 117 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 VKORC1Q9BQB6 163 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 CADP27708 2225 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 IGHV3OR16-8A0A075B7F1 116 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 IGHV1-18A0A0C4DH31 117 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 K7EN84 100 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 SMAD7O15105 426 aaKnown RBP10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 NCR2O95944 276 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 TOMM40O96008 361 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 EVI2AP22794 236 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 NPPCP23582 126 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 FAM27E3Q08E93 113 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 PMS2P5A8MQ11 134 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 FAM106CPP0CH98 169 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 EMP1P54849 157 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 LYZL1Q6UWQ5 148 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 USF3Q68DE3 2245 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 SPRR3Q9UBC9 169 aa10.72□□□□□ -0.69
PCDHGB3-201ENST00000576222 LMO1P25800 156 aa10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 Q0VFX4 171 aa10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 TRGV9Q99603 122 aa10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 SPAARA0A1B0GVQ0 90 aa10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 CEACAM8P31997 349 aaPredicted RBP10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 TMEM167AQ8TBQ9 72 aa10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 RNASE8Q8TDE3 154 aaKnown RBP10.71□□□□□ -0.69
PCDHGB3-201ENST00000576222 H3BRM9 83 aa10.71□□□□□ -0.7
PCDHGB3-201ENST00000576222 PSG3Q16557 428 aa10.71□□□□□ -0.7
PCDHGB3-201ENST00000576222 NCOA6Q14686 2063 aaPredicted RBP10.71□□□□□ -0.7
PCDHGB3-201ENST00000576222 NPIPB5A8MRT5 1133 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 K7EP13 123 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 CKS1BP61024 79 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 BVES-AS1Q5T3Y7 98 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 SLC25A2Q9BXI2 301 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 SLC25A39Q9BZJ4 359 aaPredicted RBP10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 ARHGAP21Q5T5U3 1957 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGKV1D-17A0A075B6S4 117 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGLC7A0M8Q6 106 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 IFI27P40305 119 aaPredicted RBP10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 ID1P41134 155 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 LSM4Q9Y4Z0 139 aaKnown RBP10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 CD24P25063 80 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 ASCL2Q99929 193 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 DPM3Q9P2X0 92 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 C9orf118A6NHY6 69 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 C17orf100A8MU93 164 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 SRSF1Q07955 248 aaKnown RBP eCLIP10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 TEX29Q8N6K0 151 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 PROK2Q9HC23 129 aa10.7□□□□□ -0.7
PCDHGB3-201ENST00000576222 TRAV8-2A0A0B4J237 113 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 NTN3O00634 580 aaPredicted RBP10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGKV1-16P04430 117 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 ADAMTSL5Q6ZMM2 481 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 ANAPC13Q9BS18 74 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 CYSLTR1Q9Y271 337 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGHV1-24A0A0C4DH33 117 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 PPP1R17O96001 155 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 ARMS2P0C7Q2 107 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 FAM71F2Q6NXP2 309 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 CDX4O14627 284 aaPredicted RBP10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 Q6ZSR3 168 aa10.69□□□□□ -0.7
PCDHGB3-201ENST00000576222 IGHV2-70DA0A0C4DH43 119 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 COX8AP10176 69 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 CT83Q5H943 113 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 KLF17Q5JT82 389 aaPredicted RBP10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 GPR179Q6PRD1 2367 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 LOC105371242A0A075B767 164 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 C9orf172C9J069 976 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 VWC2Q2TAL6 325 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 FAM74A4Q5TZK3 123 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 SYT8Q8NBV8 401 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 TMEM133Q9H2Q1 129 aa10.68□□□□□ -0.7
PCDHGB3-201ENST00000576222 C11orf1Q9H5F2 150 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms