RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 DLK1P80370 383 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 FCN2Q15485 313 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 GDF5OSQ5U4N7 250 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 TMEM144Q7Z5S9 345 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 TMEM252Q8N6L7 170 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 BPIFCQ8NFQ6 507 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 OR1B1Q8NGR6 318 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 UHRF2Q96PU4 802 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 OVOL2Q9BRP0 275 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 GPN1Q9HCN4 374 aaPredicted RBP7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 MGAT4CQ9UBM8 478 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 SLC45A2Q9UMX9 530 aa7.22□□□□□ -1.25
GTF3C1-212ENST00000570129 LOC102724200A0A096LPH7 203 aaPredicted RBP7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 TRAV5A0A0B4J249 113 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 H3BTX0 84 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 SSNA1O43805 119 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 HLA-DMBP28068 263 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 TAS2R30P59541 319 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 DEFA1P59665 94 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 DEFA3P59666 94 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 RPP30P78346 268 aaKnown RBP7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 MIC13Q5XKP0 118 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 OR11H7Q8NGC8 314 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 OR10P1Q8NGE3 313 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 GGTLC1Q9BX51 225 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 SLC25A32Q9H2D1 315 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 SLC25A22Q9H936 323 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 WFDC1Q9HC57 220 aa7.21□□□□□ -1.26
GTF3C1-212ENST00000570129 PIGBOS1A0A0B4J2F0 54 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 ZNF98A6NK75 572 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 F6UB75 175 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 AGPAT2O15120 278 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 EIF3GO75821 320 aaKnown RBP eCLIP7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 DCTN2Q13561 401 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 DEFB135Q30KP9 77 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 GCSAMLQ5JQS6 135 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 PSMG4Q5JS54 123 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 ZFAND6Q6FIF0 208 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 SIGLEC15Q6ZMC9 328 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 RSG1Q9BU20 258 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 ARL6Q9H0F7 186 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 EDA2RQ9HAV5 297 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 TENM2Q9NT68 2774 aa7.2□□□□□ -1.26
GTF3C1-212ENST00000570129 TRAV8-2A0A0B4J237 113 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 A0A1W2PS18 150 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 SOCS3O14543 225 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 PRAF2O60831 178 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 ZNF705DP0CH99 300 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 ZNF705BP0CI00 300 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 FXYD7P58549 80 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 ACTL10Q5JWF8 245 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 THAP6Q8TBB0 222 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 PPP1R1CQ8WVI7 109 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 TMEM37Q8WXS4 190 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 PPP1R14BQ96C90 147 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 LINC00052Q96N35 136 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 WWC2-AS2Q96NR7 200 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 LYRM2Q9NU23 88 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 CLEC5AQ9NY25 188 aa7.19□□□□□ -1.26
GTF3C1-212ENST00000570129 CSMD3Q7Z407 3707 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 UBE2L5PA0A1B0GUS4 154 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 H3BRN7 92 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 DEFB4AO15263 64 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 HYPMO75409 117 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 MPC2O95563 127 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 OR5G3P0C626 314 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 C4BPBP20851 252 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 SULT1A1P50225 295 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 PAFAH1B2P68402 229 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 CLINT1Q14677 625 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 SPATA31B1PQ5VZV4 182 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 OR8I2Q8N0Y5 310 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 RNF182Q8N6D2 247 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 SPATA25Q9BR10 227 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 SHANK2-AS3Q9BTD1 123 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 SLC25A39Q9BZJ4 359 aaPredicted RBP7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 SMIM3Q9BZL3 60 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 NMES1Q9C002 83 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 TMEM231Q9H6L2 316 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 ZMAT4Q9H898 229 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 NRN1Q9NPD7 142 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 WDR83OSQ9Y284 106 aa7.18□□□□□ -1.26
GTF3C1-212ENST00000570129 HELTA6NFD8 242 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 MRPS12O15235 138 aaKnown RBP7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 PTTG1O95997 202 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 LYL1P12980 280 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 VWC2Q2TAL6 325 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 TRPT1Q86TN4 253 aaKnown RBP7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 CHAC2Q8WUX2 184 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 GRAMD2BQ96HH9 432 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 TMEM147Q9BVK8 224 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 MBD2Q9UBB5 411 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 HIGD1AQ9Y241 93 aa7.17□□□□□ -1.26
GTF3C1-212ENST00000570129 KMT2CQ8NEZ4 4911 aaKnown RBP7.16□□□□□ -1.26
GTF3C1-212ENST00000570129 TRAV2A0A0B4J234 112 aa7.16□□□□□ -1.26
GTF3C1-212ENST00000570129 H3BQ15 152 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms