RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ANXA7P20073 488 aaKnown RBP12.04□□□□□ -0.48
HDGFL3-203ENST00000563404 AP2S1P53680 142 aaPredicted RBP12.04□□□□□ -0.48
HDGFL3-203ENST00000563404 DEFB1P60022 68 aa12.04□□□□□ -0.48
HDGFL3-203ENST00000563404 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
HDGFL3-203ENST00000563404 NRN1Q9NPD7 142 aa12.04□□□□□ -0.48
HDGFL3-203ENST00000563404 SNRPGP15A8MWD9 76 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 RTL8CO15255 209 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 VAMP1P23763 118 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 OXA1LQ15070 435 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 C4orf46Q504U0 113 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 GDF5OSQ5U4N7 250 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 SIGLEC15Q6ZMC9 328 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 POM121L12Q8N7R1 296 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 MITD1Q8WV92 249 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 SEPSECSQ9HD40 501 aaKnown RBP12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 CACFD1Q9UGQ2 172 aa12.03□□□□□ -0.48
HDGFL3-203ENST00000563404 CEBPZOSA8MTT3 80 aa12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 TOMM40O96008 361 aa12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF705AQ6ZN79 300 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 COQ8AQ8NI60 647 aa12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF431Q8TF32 576 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 ACY3Q96HD9 319 aa12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 GPN1Q9HCN4 374 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
HDGFL3-203ENST00000563404 M0R2N4 97 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 RD3LP0DJH9 198 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 PSG1P11464 419 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 SLC25A6P12236 298 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 NPY1RP25929 384 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 GSG1LQ6UXU4 331 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 OR51G1Q8NGK1 321 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 NDUFAF3Q9BU61 184 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 C1QTNF4Q9BXJ3 329 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 TMED3Q9Y3Q3 217 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF705FA8MVS1 300 aaPredicted RBP12□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF705DP0CH99 300 aaPredicted RBP12□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF705BP0CI00 300 aaPredicted RBP12□□□□□ -0.49
HDGFL3-203ENST00000563404 P0DMU3 169 aa12□□□□□ -0.49
HDGFL3-203ENST00000563404 FAM231AP0DMU4 169 aa12□□□□□ -0.49
HDGFL3-203ENST00000563404 FAM231CP0DMU5 169 aa12□□□□□ -0.49
HDGFL3-203ENST00000563404 NKX2-1P43699 371 aaPredicted RBP12□□□□□ -0.49
HDGFL3-203ENST00000563404 FXYD7P58549 80 aa12□□□□□ -0.49
HDGFL3-203ENST00000563404 NUTF2P61970 127 aaKnown RBP12□□□□□ -0.49
HDGFL3-203ENST00000563404 NEU1Q99519 415 aa12□□□□□ -0.49
HDGFL3-203ENST00000563404 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
HDGFL3-203ENST00000563404 IGKV3-20P01619 116 aa11.99□□□□□ -0.49
HDGFL3-203ENST00000563404 ETFRF1Q6IPR1 90 aa11.99□□□□□ -0.49
HDGFL3-203ENST00000563404 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
HDGFL3-203ENST00000563404 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 C7orf66A4D0T2 115 aa11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 EMP1P54849 157 aa11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 LYZL2Q7Z4W2 148 aa11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 C12orf45Q8N5I9 185 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF709Q8N972 641 aa11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 SAV1Q9H4B6 383 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
HDGFL3-203ENST00000563404 SOCS3O14543 225 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 IFNA10P01566 189 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 IFNA21P01568 189 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 SPART-AS1P0CW21 52 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 SULT1A3P0DMM9 295 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 SULT1A4P0DMN0 295 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 MED14OSP0DP75 135 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 ZNF90Q03938 601 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 PBDC1Q9BVG4 233 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 HSPB7Q9UBY9 170 aa11.97□□□□□ -0.49
HDGFL3-203ENST00000563404 HSPG2P98160 4391 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 IGHV3OR16-12A0A075B7B8 117 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 NOXA1Q86UR1 476 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 LINC00052Q96N35 136 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 SEC22CQ9BRL7 303 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 RBKSQ9H477 322 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 DKK2Q9UBU2 259 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 U3KQ87 197 aa11.96□□□□□ -0.49
HDGFL3-203ENST00000563404 SMIM9A6NGZ8 99 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 GAMTQ14353 236 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 SMCO1Q147U7 214 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 FAM222AQ5U5X8 452 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 OR8G2PQ6IF36 304 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 Q6ZR54 194 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 SLC35B3Q9H1N7 401 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
HDGFL3-203ENST00000563404 IGLV2-18A0A075B6J9 118 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 F6UB75 175 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 PITX3O75364 302 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 GGNBP1Q5YKI7 109 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 C1orf158Q8N1D5 194 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
HDGFL3-203ENST00000563404 ZFP92A6NM28 416 aa11.93□□□□□ -0.5
HDGFL3-203ENST00000563404 HOXB5P09067 269 aa11.93□□□□□ -0.5
HDGFL3-203ENST00000563404 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms