RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 GLRXP35754 106 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 GAGE1Q13065 139 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 TM4SF20Q53R12 229 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 TRAV9-1A0A075B6T8 112 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 FBLN7Q53RD9 439 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 LDLRAD2Q5SZI1 272 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 GRAMD2BQ96HH9 432 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 TMUB1Q9BVT8 246 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 LOC105371242A0A075B767 164 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 M0R3E3 92 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 BCL6BQ8N143 479 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 OR8A1Q8NGG7 326 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 ZNF714Q96N38 554 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
PPP4R3A-208ENST00000555462 IGHV3-23P01764 117 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 HIST1H1EP10412 219 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 MZT1Q08AG7 82 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 PLGLAQ15195 96 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 ZNF788Q6ZQV5 615 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 OR4F17Q8NGA8 305 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 SRSF12Q8WXF0 261 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 Q9H3A6 140 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 IGHG3P01860 377 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 HTR1DP28221 377 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 FAM222BQ8WU58 562 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 VPS25Q9BRG1 176 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 FAM215AQ9Y5M1 114 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 TCRBV4S1A1TA0A5B7 111 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 LY6HO94772 140 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 ADTRPQ96IZ2 230 aa13.68□□□□□ -0.22
PPP4R3A-208ENST00000555462 BPIFB3P59826 476 aa13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 HBBP68871 147 aa13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 FBXL15Q9H469 300 aa13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 HILPDAQ9Y5L2 63 aa13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 UBE2V1Q13404 147 aa13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 OR1L4Q8NGR5 311 aa13.67□□□□□ -0.22
PPP4R3A-208ENST00000555462 PPIAL4DF5H284 164 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 NCR2O95944 276 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 RAB37Q96AX2 223 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 ARMS2P0C7Q2 107 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 CD40P25942 277 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 PRSS57Q6UWY2 283 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 RPP21Q9H633 154 aaKnown RBP13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 K7EMI3 77 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 TNFSF4P23510 183 aa13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3A-208ENST00000555462 SYS1-DBNDD2H3BUS1 97 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 OR4C13Q8NGP0 309 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 GPR82Q96P67 336 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 NKX6-3A6NJ46 265 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 CFHR2P36980 270 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 RBX1P62877 108 aa13.65□□□□□ -0.22
PPP4R3A-208ENST00000555462 IGLC7A0M8Q6 106 aa13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 SMKR1H3BMG3 65 aa13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 TMEM11P17152 192 aa13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 TNFRSF1AP19438 455 aa13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 C22orf15Q8WYQ4 148 aa13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 CR1LQ2VPA4 569 aa13.64□□□□□ -0.23
PPP4R3A-208ENST00000555462 PTPRQQ9UMZ3 2332 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 HSBP1L1C9JCN9 74 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 BSPH1Q075Z2 132 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 TIMM23BQ5SRD1 257 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 PRSS33Q8NF86 280 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 CTSZQ9UBR2 303 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 SPTBN4Q9H254 2564 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 CNIH1O95406 144 aa13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 C1orf162Q8NEQ5 155 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 COL27A1Q8IZC6 1860 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3A-208ENST00000555462 A8MWL6 223 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 F11RQ9Y624 299 aaKnown RBP13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 TCRAP04437 139 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 PRSS3P2Q8NHM4 247 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 OSR1Q8TAX0 266 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 CHRDL1Q9BU40 450 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 FTH1P19P0C7X4 201 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 SLC25A34Q6PIV7 304 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 PERPQ96FX8 193 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 GAL3ST2Q9H3Q3 398 aa13.62□□□□□ -0.23
PPP4R3A-208ENST00000555462 SUB1P53999 127 aaKnown RBP eCLIP13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 C18orf15Q96N68 181 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 CHODLQ9H9P2 273 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 MRPL27Q9P0M9 148 aaKnown RBP13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 NDUFB3O43676 98 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 ZADH2Q8N4Q0 377 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 DYNLRB1Q9NP97 96 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 VPS13CQ709C8 3753 aa13.61□□□□□ -0.23
PPP4R3A-208ENST00000555462 PPIAL4EA0A075B759 164 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms