RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CD177Q8N6Q3 437 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 TMEM167AQ8TBQ9 72 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 GFRA3O60609 400 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 ZNF562Q6V9R5 426 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 TMEM86BQ8N661 226 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
VTI1B-204ENST00000554659 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
VTI1B-204ENST00000554659 OVOL1O14753 267 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 IL18BPO95998 194 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 NPC2P61916 151 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 GUSBP1Q15486 140 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 C7orf69Q9H7B7 122 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 NCR2O95944 276 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 LINC00158P58513 81 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 SLC25A39Q9BZJ4 359 aaPredicted RBP11.46□□□□□ -0.57
VTI1B-204ENST00000554659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.46□□□□□ -0.57
VTI1B-204ENST00000554659 NDUFS6O75380 124 aaKnown RBP11.46□□□□□ -0.57
VTI1B-204ENST00000554659 CD24P25063 80 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 C10orf55Q5SWW7 151 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 RNF5Q99942 180 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 PEMTQ9UBM1 199 aa11.46□□□□□ -0.57
VTI1B-204ENST00000554659 CASP8AP2Q9UKL3 1982 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 TDGF1P3P51864 188 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 MST1LQ2TV78 715 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 MPV17L2Q567V2 206 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 LCN12Q6JVE5 192 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.58
VTI1B-204ENST00000554659 ZNF48Q96MX3 618 aaPredicted RBP11.46□□□□□ -0.58
VTI1B-204ENST00000554659 RALGAPA1Q6GYQ0 2036 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 FREM3P0C091 2139 aa11.46□□□□□ -0.58
VTI1B-204ENST00000554659 A0A087X0K7 114 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 A0A1B0GWJ7 208 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 hDV102S1A0JD36 115 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 PSG1P11464 419 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 COLCA1Q6ZS62 124 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 NTF4P34130 210 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
VTI1B-204ENST00000554659 GATD1Q8NB37 220 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 C15orf62A8K5M9 175 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 PMS2P5A8MQ11 134 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 TMEM238C9JI98 176 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 FNDC10F2Z333 226 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 NCOR1O75376 2440 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 LINC00473A8K010 186 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 LAGE3Q14657 143 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 A0A1W2PRX2 142 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
VTI1B-204ENST00000554659 LSM4Q9Y4Z0 139 aaKnown RBP11.45□□□□□ -0.58
VTI1B-204ENST00000554659 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
VTI1B-204ENST00000554659 THBDP07204 575 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 S100A7L2Q5SY68 101 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 SPSB3Q6PJ21 355 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 DOCK10Q96BY6 2186 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 D6R8Y8 96 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 MLNRO43193 412 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 SELLP14151 372 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 TMEM200BQ69YZ2 307 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 POLEQ07864 2286 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 A0A0G2JRQ6 117 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 E9PQ18 207 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 RPRMLQ8N4K4 120 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 WFDC12Q8WWY7 111 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
VTI1B-204ENST00000554659 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
VTI1B-204ENST00000554659 CHCHD5Q9BSY4 110 aa11.44□□□□□ -0.58
VTI1B-204ENST00000554659 CD33P20138 364 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 CDKN1AP38936 164 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 FXYD7P58549 80 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 PAX8Q06710 450 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 STHQ8IWL8 128 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 CITED2Q99967 270 aaPredicted RBP11.43□□□□□ -0.58
VTI1B-204ENST00000554659 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 TRGV4A0A0C4DH28 118 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 JPT2Q9H910 190 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 TMEM8BA6NDV4 472 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 H0YJW9 148 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 LGALS1P09382 135 aaKnown RBP11.43□□□□□ -0.58
VTI1B-204ENST00000554659 B3GALT5-AS1P59052 145 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 UBE2V1Q13404 147 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
VTI1B-204ENST00000554659 IGKV2-40A0A087WW87 121 aaPredicted RBP11.42□□□□□ -0.58
VTI1B-204ENST00000554659 IGHV1-3A0A0C4DH29 117 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 ADARB2-AS1A8MUL3 147 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 IGKV2D-40P01614 121 aaPredicted RBP11.42□□□□□ -0.58
VTI1B-204ENST00000554659 ESDP10768 282 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms