RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SUB1P53999 127 aaKnown RBP eCLIP7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 KLF5Q13887 457 aaPredicted RBP7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 HCP5Q6MZN7 132 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 ATP6V0E2Q8NHE4 81 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 C1orf159Q96HA4 380 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 TM2D1Q9BX74 207 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 KIAA1551Q9HCM1 1747 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 HAX1O00165 279 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 FREM3P0C091 2139 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 MYOD1P15172 320 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 ADAMTSL4Q6UY14 1074 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 LHFPL1Q86WI0 220 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 KIR2DL5BQ8NHK3 375 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 SLC25A2Q9BXI2 301 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 MAP1BP46821 2468 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 TICRRQ7Z2Z1 1910 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV3D-15A0A087WSY6 115 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 IGHV1OR15-9A0A0B4J2B8 117 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 IGHV5-51A0A0C4DH38 117 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 CXCL13O43927 109 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV3-15P01624 115 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 TFF1P04155 84 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 CELA2BP08218 269 aaPredicted RBP7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 S4R3C0 116 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 C2orf70A6NJV1 201 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 ORMDL2Q53FV1 153 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 ORMDL3Q8N138 153 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RPRMLQ8N4K4 120 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 CDIP1Q9H305 208 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 TRBV20OR9-2A0A075B6H5 130 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 FAM168AQ92567 244 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 PILRAQ9UKJ1 303 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 IGHV3OR15-7A0A075B7D8 119 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 TEX49A0A1B0GTD5 131 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 TMEM89A2RUT3 159 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RBMY1BA6NDE4 496 aaKnown RBP7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RBMY1EA6NEQ0 496 aaKnown RBP7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RBMY1DP0C7P1 496 aaKnown RBP7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RBMY1A1P0DJD3 496 aaKnown RBP7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RBMY1CP0DJD4 496 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 SMIM10L1P0DMW3 83 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 LINC00205P59089 165 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 RBMY1FQ15415 496 aaKnown RBP7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 VN1R4Q7Z5H5 301 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 SMIM10Q96HG1 83 aa7.36□□□□□ -1.23
GTF2A1-203ENST00000553612 C2orf91Q6ZV80 131 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 LINC00312Q9Y6C7 94 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 TPRP12270 2363 aaKnown RBP7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 NPYP01303 97 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 TCRAP04437 139 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 NRXN3Q9Y4C0 1643 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 IGHV1OR21-1A0A087WYE8 117 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 FGFBP3Q8TAT2 258 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 TRAV17A0A0B4J275 112 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 LINC00310P59036 64 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 TMEM258P61165 79 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 PLXND1Q9Y4D7 1925 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 A0A1W2PR77 199 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 TMEM30CPA0ZSE6 113 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 NPPCP23582 126 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 DAD1P61803 113 aa7.35□□□□□ -1.23
GTF2A1-203ENST00000553612 IGHV3OR16-8A0A075B7F1 116 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 IGHV3-35A0A0C4DH35 117 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 PRRG2O14669 202 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 IGLV3-27P01718 113 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 CARD19Q96LW7 228 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 VEGFBP49765 207 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 ZNF714Q96N38 554 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 RPUSD1Q9UJJ7 312 aaKnown RBP7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 DOCK10Q96BY6 2186 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 SCN11AQ9UI33 1791 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 ZNF441Q8N8Z8 693 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 DEFB118Q96PH6 123 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 A0A0G2JRQ6 117 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV1D-42A0A075B6H8 117 aa7.34□□□□□ -1.24
GTF2A1-203ENST00000553612 IGKV3D-11A0A0A0MRZ8 115 aa7.34□□□□□ -1.24
GTF2A1-203ENST00000553612 IGKV3-11P04433 115 aa7.34□□□□□ -1.24
GTF2A1-203ENST00000553612 FOXG1P55316 489 aaPredicted RBP7.34□□□□□ -1.24
GTF2A1-203ENST00000553612 PEMTQ9UBM1 199 aa7.34□□□□□ -1.24
GTF2A1-203ENST00000553612 TCL1BO95988 128 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IGFBP3P17936 291 aaPredicted RBP7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 FOXB1Q99853 325 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 DOCK2Q92608 1830 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IGHG4P01861 327 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IDI2-AS1Q9NZ38 188 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IGLV3-16A0A075B6K0 115 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IGLV1-36A0A0B4J1U3 117 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IGHV3-72A0A0B4J1Y9 119 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 VWC2LB2RUY7 222 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 E9PLD3 99 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms