RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 IGFL4Q6B9Z1 124 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 Q6ZR54 194 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 CENPSQ8N2Z9 138 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 SHPKQ9UHJ6 478 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 KCNIP3Q9Y2W7 256 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 HSPG2P98160 4391 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 GPX4P36969 197 aaPredicted RBP8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 PSMB3P49720 205 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 OR8G2PQ6IF36 304 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 FOXI2Q6ZQN5 318 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 GPR141Q7Z602 305 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 OR1S1Q8NH92 325 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 MCUBQ9NWR8 336 aa8.19□□□□□ -1.1
PRPF40B-212ENST00000551111 A0A0J9YX75 114 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 PRSS46E5RG02 174 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 TNFSF8P32971 234 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 PSG9Q00887 426 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 LGALS9BQ3B8N2 356 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 OR8I2Q8N0Y5 310 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 SLC35E1Q96K37 410 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 NIPSNAP3BQ9BS92 247 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 MRPS26Q9BYN8 205 aaKnown RBP8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 SLIRPQ9GZT3 109 aaKnown RBP8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 MAGT1Q9H0U3 335 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 SLC25A32Q9H2D1 315 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 SCP2D1Q9UJQ7 156 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 YTHDF2Q9Y5A9 579 aaKnown RBP8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 RFNGQ9Y644 331 aa8.18□□□□□ -1.1
PRPF40B-212ENST00000551111 LOC102723971A0A1B0GUV8 181 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 SNRPGP15A8MWD9 76 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 ID1P41134 155 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 PAX9P55771 341 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 C1orf194Q5T5A4 169 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 TMED4Q7Z7H5 227 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 ZNF575Q86XF7 245 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 THAP8Q8NA92 274 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 COQ8AQ8NI60 647 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 PPP1R14BQ96C90 147 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 TRGV9Q99603 122 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 RSG1Q9BU20 258 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 PAIP2BQ9ULR5 123 aaKnown RBP8.17□□□□□ -1.1
PRPF40B-212ENST00000551111 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 TMEM189A5PLL7 270 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 ZNF98A6NK75 572 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 A8MTW9 85 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 WRBO00258 174 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 ISLRO14498 428 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 CRXO43186 299 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 FCN2Q15485 313 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 RNF182Q8N6D2 247 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 TRIM63Q969Q1 353 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 LRP1BQ9NZR2 4599 aa8.16□□□□□ -1.1
PRPF40B-212ENST00000551111 FABP12A6NFH5 140 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 M0R2Z0 102 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 IFNA21P01568 189 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 AZU1P20160 251 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 SPINK13Q1W4C9 94 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 C16orf92Q96LL3 132 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 SCGB3A2Q96PL1 93 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 C7orf50Q9BRJ6 194 aaKnown RBP8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 DOK5Q9P104 306 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 CACFD1Q9UGQ2 172 aa8.15□□□□□ -1.1
PRPF40B-212ENST00000551111 H3BMQ9 156 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 H3BP45 60 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 HBE1P02100 147 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 HOXB5P09067 269 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 ORM2P19652 201 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 VAMP1P23763 118 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 NUP62P37198 522 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 CNN1P51911 297 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 ATP5IP56385 69 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 PPP1R1AQ13522 171 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 TMEM128Q5BJH2 165 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 EBLN2Q6P2I7 272 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 OR11H7Q8NGC8 314 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 RAB2BQ8WUD1 216 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 IGF2BP2-AS1Q96M15 143 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 RSL24D1Q9UHA3 163 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 GOLT1BQ9Y3E0 138 aa8.14□□□□□ -1.11
PRPF40B-212ENST00000551111 TRAV12-2A0A075B6T6 113 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 PLAC8L1A1L4L8 177 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 SYNGR2O43760 224 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 CCNKO75909 580 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 ANXA3P12429 323 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 TMBIM6P55061 237 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 DAD1P61803 113 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 RAB11AP62491 216 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms