RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 GNG7O60262 68 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 GGCTO75223 188 aaKnown RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 MPDU1O75352 247 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 CLN5O75503 358 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 DFFBO76075 338 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 CST7O76096 145 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 CFDP00746 253 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 C1QBP02746 253 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 HSPB1P04792 205 aaKnown RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 CLEC3BP05452 202 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 CTSGP08311 255 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 MYCNOSP40205 109 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 RND2P52198 227 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 YPEL3P61236 119 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 RELQ04864 619 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 SLC38A11Q08AI6 406 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF616Q08AN1 781 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 GAMTQ14353 236 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF345Q14585 488 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 Q5BKY6 102 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 OR8G2PQ6IF36 304 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 ACOT7LQ6ZUV0 252 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 TMEM144Q7Z5S9 345 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 HAPLN4Q86UW8 402 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 THAP8Q8NA92 274 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 OR1S2Q8NGQ3 325 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 OR1N2Q8NGR9 330 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 NEURL2Q9BR09 285 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 TMEM147Q9BVK8 224 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 NPVFQ9HCQ7 196 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 UQCC1Q9NVA1 299 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 PAIP2BQ9ULR5 123 aaKnown RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 HSPB11Q9Y547 144 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 OR2T8A6NH00 312 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 LINC01619G3V211 115 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 CCL24O00175 119 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 BMPR1BO00238 502 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 TAAR5O14804 337 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 PLXNB1O43157 2135 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 IGKV1-17P01599 117 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 IGHV3-11P01762 117 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 IGLC1P0CG04 106 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 OR10J1P30954 320 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 GPR183P32249 361 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 ARL3P36405 182 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 SELENOTP62341 195 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 AKR1C1Q04828 323 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 ARL16Q0P5N6 197 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 OR2F1Q13607 317 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 RAB31Q13636 194 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 ZFP69Q49AA0 526 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 Q56UQ5 140 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 DGAT2L7PQ6IED9 249 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 CLEC19AQ6UXS0 136 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 GPHB5Q86YW7 130 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 OR5C1Q8NGR4 320 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 C2CD4CQ8TF44 421 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 ACY3Q96HD9 319 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 HYLS1Q96M11 299 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 TRGV9Q99603 122 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 ATP5SQ99766 215 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 PARD6GQ9BYG4 376 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-213ENST00000550629 ZC4H2Q9NQZ6 224 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 KCNIP2Q9NS61 270 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 WDR83OSQ9Y284 106 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 LSM4Q9Y4Z0 139 aaKnown RBP4.38□□□□□ -1.71
SCAF11-213ENST00000550629 VWFP04275 2813 aa4.38□□□□□ -1.71
SCAF11-213ENST00000550629 TET2Q6N021 2002 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-213ENST00000550629 A0A0D9SG52 128 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 RNF222A6NCQ9 220 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 ZFP92A6NM28 416 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 A8MWP6 167 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 K7EMT4 169 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 LGALS9O00182 355 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 NDUFA4O00483 81 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 ARPC5O15511 151 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 PFDN1O60925 122 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 OR2C1O95371 312 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 IGHV3-48P01763 117 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 RD3LP0DJH9 198 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 C4BPBP20851 252 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-213ENST00000550629 AP2S1P53680 142 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-213ENST00000550629 DEFA5Q01523 94 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF266Q14584 549 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 RPEL1Q2QD12 228 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 NSUN5P1Q3KNT7 163 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF600Q6ZNG1 722 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 S100A7AQ86SG5 101 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 KCNRGQ8N5I3 272 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 UBAC2Q8NBM4 344 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 OR11H1Q8NG94 326 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 Q8WTZ3 238 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 OR5B12Q96R08 314 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 CHRDL1Q9BU40 450 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 MFFQ9GZY8 342 aa4.37□□□□□ -1.71
SCAF11-213ENST00000550629 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms