RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 HOXA3O43365 443 aaPredicted RBP9.93□□□□□ -0.82
NR4A1-215ENST00000550557 Q6ZS49 121 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 OR10W1Q8NGF6 305 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 SFRP2Q96HF1 295 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 MBNL3Q9NUK0 354 aaKnown RBP9.93□□□□□ -0.82
NR4A1-215ENST00000550557 IGHV4-61A0A0C4DH41 118 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 WIPF3A6NGB9 483 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 C1orf122Q6ZSJ8 110 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 BEND2Q8NDZ0 799 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 DNAH12Q6ZR08 3092 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 ASIPP42127 132 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 NMUP48645 174 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 MAP1LC3AQ9H492 121 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 PIEZO2Q9H5I5 2752 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 PEF1Q9UBV8 284 aaKnown RBP9.93□□□□□ -0.82
NR4A1-215ENST00000550557 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 ABCA2Q9BZC7 2435 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 RNASE4P34096 147 aaKnown RBP9.93□□□□□ -0.82
NR4A1-215ENST00000550557 MCRIP2Q9BUT9 160 aaKnown RBP9.93□□□□□ -0.82
NR4A1-215ENST00000550557 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
NR4A1-215ENST00000550557 ZNF503-AS2A6NEH8 195 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 IGHV4-39P01824 125 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
NR4A1-215ENST00000550557 GCHFRP30047 84 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 TAS2R60P59551 318 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 PRDM13Q9H4Q3 707 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 H7C1H1 209 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 NTF4P34130 210 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 TFF3Q07654 80 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 TRBV7-1A0A0A6YYK4 115 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 C10orf142B7Z368 130 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 LOXP28300 417 aaPredicted RBP9.92□□□□□ -0.82
NR4A1-215ENST00000550557 RPL23P62829 140 aaKnown RBP9.92□□□□□ -0.82
NR4A1-215ENST00000550557 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
NR4A1-215ENST00000550557 PCDH15Q96QU1 1955 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 M0R381 172 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 SRIP30626 198 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 SYNJ2BPP57105 145 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 HIST3H2BBQ8N257 126 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 RFNGQ9Y644 331 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 ADAMTS9Q9P2N4 1935 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 TRBV6-6A0A0A6YYG2 114 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 CGAP01215 116 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 IGHV2-5P01817 119 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 SOX21Q9Y651 276 aaPredicted RBP9.91□□□□□ -0.82
NR4A1-215ENST00000550557 ARFGEF3Q5TH69 2177 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 MED13Q9UHV7 2174 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 LEPP41159 167 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 LYPD6Q86Y78 171 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 MBD3L1Q8WWY6 194 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 FAM223BA6NKX1 122 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 PAX1P15863 534 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 FOXL1Q12952 345 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 C2orf83Q53S99 150 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 FAM223AQ8IWN6 122 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 OR1N2Q8NGR9 330 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 VSIRQ9H7M9 311 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 TNFRSF18Q9Y5U5 241 aa9.91□□□□□ -0.82
NR4A1-215ENST00000550557 TRAV1-1A0A0B4J248 108 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 CRXO43186 299 aaPredicted RBP9.9□□□□□ -0.82
NR4A1-215ENST00000550557 FAM71F2Q6NXP2 309 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 ZNF256Q9Y2P7 627 aaPredicted RBP9.9□□□□□ -0.82
NR4A1-215ENST00000550557 TLN1Q9Y490 2541 aaKnown RBP9.9□□□□□ -0.82
NR4A1-215ENST00000550557 CEP295Q9C0D2 2601 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 NAV3Q8IVL0 2385 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 ZNF688P0C7X2 276 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 HINT1P49773 126 aaPredicted RBP9.9□□□□□ -0.82
NR4A1-215ENST00000550557 NMSQ5H8A3 153 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 GRIFINA4D1Z8 144 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 FAM90A9PA6NNJ1 464 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 PCP4P48539 62 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 GFI1BQ5VTD9 330 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 COPS9Q8WXC6 57 aa9.9□□□□□ -0.82
NR4A1-215ENST00000550557 PLP1P60201 277 aa9.9□□□□□ -0.83
NR4A1-215ENST00000550557 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 DEFB112Q30KQ8 113 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 TMEM170AQ8WVE7 144 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 RAB37Q96AX2 223 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 C1QTNF4Q9BXJ3 329 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 OVOL3O00110 214 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 HBBP68871 147 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 C10orf105Q8TEF2 133 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 NEU1Q99519 415 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 TRBV24-1A0A075B6N3 115 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 LOC389332A0A1B0GUA5 103 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 TEX36Q5VZQ5 186 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 ZNF562Q6V9R5 426 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 SMIM12Q96EX1 92 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 KCNS1Q96KK3 526 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 HIST1H2BLQ99880 126 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 PARD6GQ9BYG4 376 aaPredicted RBP9.89□□□□□ -0.83
NR4A1-215ENST00000550557 IL36BQ9NZH7 164 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 CD7P09564 240 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
NR4A1-215ENST00000550557 MUC21Q5SSG8 566 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms