RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 SUN5Q8TC36 379 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 GATAD1Q8WUU5 269 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 C17orf50Q8WW18 174 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 NPIPB3Q92617 1050 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 RCC1LQ96I51 464 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 TRGV9Q99603 122 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 LYSTQ99698 3801 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 ASCL2Q99929 193 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 MRPL32Q9BYC8 188 aaKnown RBP5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 MANBALQ9NQG1 85 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 SLC45A2Q9UMX9 530 aa5.54□□□□□ -1.52
DEPDC4-208ENST00000549341 IGHV7-81A0A0B4J1V7 117 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TMEM218A2RU14 115 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 A6NDX4 124 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 RBFOX3A6NFN3 312 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 SEC14L6B5MCN3 397 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 F8W036 122 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 COX7A2P2O60397 106 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 NDUFS6O75380 124 aaKnown RBP5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 NHLRC4P0CG21 123 aaPredicted RBP5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 APELAP0DMC3 54 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 FHITP49789 147 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 PMS2P11Q13670 270 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TMEM95Q3KNT9 176 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 AKIRIN2Q53H80 203 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 C9orf152Q5JTZ5 239 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TOR2AQ5JU69 321 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 MIC13Q5XKP0 118 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 ZFAND6Q6FIF0 208 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 SLC35E3Q7Z769 313 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 STXBP6Q8NFX7 210 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TXN2Q99757 166 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TXNDC17Q9BRA2 123 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 SLC25A22Q9H936 323 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TMEM167BQ9NRX6 74 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 ZNF355PQ9NSJ1 428 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TECRQ9NZ01 308 aaKnown RBP5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 GNG13Q9P2W3 67 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 VAX2Q9UIW0 290 aa5.53□□□□□ -1.52
DEPDC4-208ENST00000549341 TNCP24821 2201 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 A0A1B0GV50 99 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 H3BUA1 57 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 AP4M1O00189 453 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 GNG7O60262 68 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 CLN5O75503 358 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 HSPB1P04792 205 aaKnown RBP5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 LINC00869P0C866 280 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 ECSCRQ19T08 205 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 Q56UQ5 140 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 ZNF506Q5JVG8 444 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 FAM209BQ5JX69 171 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 SPSB3Q6PJ21 355 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 PQLC2Q6ZP29 291 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 SVBPQ8N300 66 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 RPP25LQ8N5L8 163 aaKnown RBP5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 WFDC9Q8NEX5 89 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 VN1R17PQ8TDU5 208 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 Q8WTZ3 238 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 RAB24Q969Q5 203 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 EEF1AKMT3Q96AZ1 226 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 ATP6V0BQ99437 205 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 FAM103A1Q9BTL3 118 aaKnown RBP5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 SEC11CQ9BY50 192 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 SLC35B3Q9H1N7 401 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 FNDC4Q9H6D8 234 aaPredicted RBP5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 ZNF702PQ9H963 129 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 DNAJC4Q9NNZ3 241 aa5.52□□□□□ -1.53
DEPDC4-208ENST00000549341 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 IGLV11-55A0A075B6I3 123 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 TRAV41A0A0B4J266 112 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 FAM223BA6NKX1 122 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 I3L2K1 104 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 ATP6V0E1O15342 81 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 NUPL2O15504 423 aaKnown RBP5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 HYPMO75409 117 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 SNAPINO95295 136 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 CD5P06127 495 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 OR5G3P0C626 314 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 C8orf88P0DMB2 117 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 BCL2P10415 239 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 CRIP2P52943 208 aaPredicted RBP5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 DEFA5Q01523 94 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 EGFEM1PQ0D2K5 195 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 HAGHQ16775 308 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 SOHLH1Q5JUK2 328 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 FAM78BQ5VT40 261 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 C10orf113Q5VZT2 155 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 ADAMTSL5Q6ZMM2 481 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 TMEM219Q86XT9 240 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 FAM223AQ8IWN6 122 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 NECAP1Q8NC96 275 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 OR5T1Q8NG75 326 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 TMEM190Q8WZ59 177 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 PRSS22Q9GZN4 317 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 VSIRQ9H7M9 311 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 SERTAD4Q9NUC0 356 aa5.51□□□□□ -1.53
DEPDC4-208ENST00000549341 C21orf62Q9NYP8 219 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms