RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 HLA-DMBP28068 263 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 RGS21Q2M5E4 152 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 TMEM128Q5BJH2 165 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 Q6ZTC4 211 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 TOMM5Q8N4H5 51 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 LRTM2Q8N967 370 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 WDR12Q9GZL7 423 aaKnown RBP8.54□□□□□ -1.04
GABPB1-206ENST00000543881 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 IGHV4-4A0A075B6R2 117 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 DUXBA0A1W2PPF3 345 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 VAMP1P23763 118 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 FAUP35544 74 aaKnown RBP8.53□□□□□ -1.04
GABPB1-206ENST00000543881 ATP5IP56385 69 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-206ENST00000543881 SNRPD3P62318 126 aaKnown RBP8.53□□□□□ -1.04
GABPB1-206ENST00000543881 PPP1R1AQ13522 171 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 OR8G2PQ6IF36 304 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 SLC35E1Q96K37 410 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 XCL2Q9UBD3 114 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
GABPB1-206ENST00000543881 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
GABPB1-206ENST00000543881 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 PRSS46E5RG02 174 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 SOCS3O14543 225 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 SFT2D2O95562 160 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 HLA-DRB4P13762 266 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 NKX2-1P43699 371 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-206ENST00000543881 AP3S2P59780 193 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 LYZP61626 148 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 OR2F1Q13607 317 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 CCDC190Q86UF4 302 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 CENPSQ8N2Z9 138 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 SUN5Q8TC36 379 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 CHAC2Q8WUX2 184 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 HLA-DRB4X5D2U9 266 aa8.52□□□□□ -1.05
GABPB1-206ENST00000543881 M0R2N4 97 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 SLC25A6P12236 298 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 C12orf74Q32Q52 190 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF767PQ75MW2 155 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 THAP8Q8NA92 274 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 TRGV9Q99603 122 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-206ENST00000543881 MAGT1Q9H0U3 335 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 SNRPGP15A8MWD9 76 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 IGKV3-20P01619 116 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 HOXB5P09067 269 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 NUP62P37198 522 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-206ENST00000543881 FXYD7P58549 80 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 RAB11AP62491 216 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 C1orf194Q5T5A4 169 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF705AQ6ZN79 300 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-206ENST00000543881 TMEM182Q6ZP80 229 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-206ENST00000543881 POM121L12Q8N7R1 296 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 C17orf77Q96MU5 243 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 LINC00052Q96N35 136 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 RNF126Q9BV68 326 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 SCRT1Q9BWW7 348 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 C1QTNF4Q9BXJ3 329 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 SAV1Q9H4B6 383 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-206ENST00000543881 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 TMED3Q9Y3Q3 217 aa8.51□□□□□ -1.05
GABPB1-206ENST00000543881 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 PIGBOS1A0A0B4J2F0 54 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 CCDC160A6NGH7 325 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 WRBO00258 174 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 SYNGR2O43760 224 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 B2MP61769 119 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 NUTF2P61970 127 aaKnown RBP8.5□□□□□ -1.05
GABPB1-206ENST00000543881 GGNBP1Q5YKI7 109 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF709Q8N972 641 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 SRRQ9GZT4 340 aa8.5□□□□□ -1.05
GABPB1-206ENST00000543881 PKD1P98161 4303 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF705FA8MVS1 300 aaPredicted RBP8.49□□□□□ -1.05
GABPB1-206ENST00000543881 F6UB75 175 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 MED6O75586 246 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 FABP1P07148 127 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF705DP0CH99 300 aaPredicted RBP8.49□□□□□ -1.05
GABPB1-206ENST00000543881 ZNF705BP0CI00 300 aaPredicted RBP8.49□□□□□ -1.05
GABPB1-206ENST00000543881 P0DMU3 169 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 GATA2P23769 480 aaPredicted RBP8.49□□□□□ -1.05
GABPB1-206ENST00000543881 PSMB3P49720 205 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 OXA1LQ15070 435 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 FOXI2Q6ZQN5 318 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 PFDN2Q9UHV9 154 aa8.49□□□□□ -1.05
GABPB1-206ENST00000543881 C9orf170A2RU37 121 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 H3BP45 60 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 ADAP1O75689 374 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 BAK1Q16611 211 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 SPANXN5Q5MJ07 72 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 OR8I2Q8N0Y5 310 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-206ENST00000543881 NEU1Q99519 415 aa8.48□□□□□ -1.05
GABPB1-206ENST00000543881 SLC35B3Q9H1N7 401 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms