RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 BOD1L1Q8NFC6 3051 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 OR4C46A6NHA9 309 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 HAX1O00165 279 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 CRYGBP07316 175 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 FAM27E3Q08E93 113 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 H1FXQ92522 213 aaKnown RBP10.98□□□□□ -0.65
VPS33A-208ENST00000543633 TMEM191AQ9H0A3 160 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
VPS33A-208ENST00000543633 LOC102724200A0A096LPH7 203 aaPredicted RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 A0A1B0GW15 77 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 SYS1-DBNDD2H3BUS1 97 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 PLAUP00749 431 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 LOXP28300 417 aaPredicted RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 HINT1P49773 126 aaPredicted RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 FOXA3P55318 350 aaPredicted RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 UBE2V1Q13404 147 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 MAJINQ3KP22 176 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 RNF24Q9Y225 148 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 LEPROTL1O95214 131 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 HLA-DRB1P01911 266 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 LINC00322Q6ZN03 302 aaPredicted RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 SRSF8Q9BRL6 282 aaKnown RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 MSRB2Q9Y3D2 182 aa10.97□□□□□ -0.65
VPS33A-208ENST00000543633 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
VPS33A-208ENST00000543633 CEP295Q9C0D2 2601 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 VSTM5A8MXK1 200 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 CHEK1O14757 476 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 IGHV1-8P0DP01 117 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 LEMD1Q68G75 181 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 CLEC5AQ9NY25 188 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 SPENQ96T58 3664 aaKnown RBP10.96□□□□□ -0.65
VPS33A-208ENST00000543633 CADP27708 2225 aa10.96□□□□□ -0.65
VPS33A-208ENST00000543633 APC2O95996 2303 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 C16orf97H3BN30 126 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 K7EP13 123 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 C22orf34Q6ZV56 151 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 PGLYRP4Q96LB8 373 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 TMEM133Q9H2Q1 129 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.66
VPS33A-208ENST00000543633 ATMQ13315 3056 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 IGHV3-48P01763 117 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 APOHP02749 345 aaPredicted RBP10.95□□□□□ -0.66
VPS33A-208ENST00000543633 RPS20P60866 119 aaKnown RBP10.95□□□□□ -0.66
VPS33A-208ENST00000543633 RBPJQ06330 500 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 ASPHD1Q5U4P2 390 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 Q6AWC8 147 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 KIR3DL3Q8N743 410 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
VPS33A-208ENST00000543633 HSBP1L1C9JCN9 74 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 CCL25O15444 150 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 COL8A1P27658 744 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 LYPD1Q8N2G4 141 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 TMEM75Q8N9X5 138 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 MAP1LC3CQ9BXW4 147 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 CTSZQ9UBR2 303 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 SIGLEC9Q9Y336 463 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 PRRC2CQ9Y520 2896 aaKnown RBP10.94□□□□□ -0.66
VPS33A-208ENST00000543633 URB1O60287 2271 aaKnown RBP10.94□□□□□ -0.66
VPS33A-208ENST00000543633 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.94□□□□□ -0.66
VPS33A-208ENST00000543633 IGHV2-70DA0A0C4DH43 119 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 FAM87AP0C7U9 286 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 IGLC1P0CG04 106 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 HCP5Q6MZN7 132 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 SLC25A34Q6PIV7 304 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 RNF5Q99942 180 aa10.94□□□□□ -0.66
VPS33A-208ENST00000543633 RBP4P02753 201 aa10.93□□□□□ -0.66
VPS33A-208ENST00000543633 LYPD2Q6UXB3 125 aa10.93□□□□□ -0.66
VPS33A-208ENST00000543633 ZNF835Q9Y2P0 537 aa10.93□□□□□ -0.66
VPS33A-208ENST00000543633 NAV3Q8IVL0 2385 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 TRAV30A0A087WSZ9 112 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 TEX22C9J3V5 150 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 ENSAO43768 121 aaKnown RBP10.92□□□□□ -0.66
VPS33A-208ENST00000543633 IGLV2-11P01706 119 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 RIGQ13278 110 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 RUSC1-AS1Q66K80 236 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 WFDC8Q8IUA0 241 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 PMCHL2Q9BQD1 86 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 SLC25A39Q9BZJ4 359 aaPredicted RBP10.92□□□□□ -0.66
VPS33A-208ENST00000543633 ANKRD11Q6UB99 2663 aaPredicted RBP10.92□□□□□ -0.66
VPS33A-208ENST00000543633 ACACAQ13085 2346 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 A0A1B0GUT8 65 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 IGLV1-47P01700 117 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 BSPH1Q075Z2 132 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
VPS33A-208ENST00000543633 SH2D7A6NKC9 451 aaPredicted RBP10.91□□□□□ -0.66
VPS33A-208ENST00000543633 K7EQM0 130 aa10.91□□□□□ -0.66
VPS33A-208ENST00000543633 OVOL3O00110 214 aa10.91□□□□□ -0.66
VPS33A-208ENST00000543633 PSG1P11464 419 aa10.91□□□□□ -0.66
VPS33A-208ENST00000543633 LYZP61626 148 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms