RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZFP92A6NM28 416 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 K7EIM0 57 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 STAG3L2P0CL84 134 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 STAG3L3P0CL85 134 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 BATFQ16520 125 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 ZNF705AQ6ZN79 300 aaPredicted RBP7.35□□□□□ -1.23
GNE-206ENST00000543356 C9orf139Q6ZV77 190 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 C16orf82Q7Z2V1 217 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 KIR2DL5AQ8N109 375 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 OR4X1Q8NH49 305 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 FAM110DQ8TAY7 271 aaPredicted RBP7.35□□□□□ -1.23
GNE-206ENST00000543356 SLC35B3Q9H1N7 401 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 MANBALQ9NQG1 85 aa7.35□□□□□ -1.23
GNE-206ENST00000543356 NAV3Q8IVL0 2385 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 H3BUX3 64 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 IGHV3-48P01763 117 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 OR5G3P0C626 314 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 PSMB3P49720 205 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 ZNF48Q96MX3 618 aaPredicted RBP7.34□□□□□ -1.23
GNE-206ENST00000543356 FANCD2OSQ96PS1 177 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 RNF2Q99496 336 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.23
GNE-206ENST00000543356 TNFRSF19Q9NS68 423 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 PITPNC1Q9UKF7 332 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 FUT9Q9Y231 359 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 SOX21Q9Y651 276 aaPredicted RBP7.34□□□□□ -1.23
GNE-206ENST00000543356 C20orf202A1L168 122 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 PSMB11A5LHX3 300 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 ATP6V0E1O15342 81 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 HMGB3O15347 200 aaKnown RBP7.34□□□□□ -1.23
GNE-206ENST00000543356 CXorf1O96002 111 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 CRIP2P52943 208 aaPredicted RBP7.34□□□□□ -1.23
GNE-206ENST00000543356 FOXC2Q99958 501 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 MRPL32Q9BYC8 188 aaKnown RBP7.34□□□□□ -1.23
GNE-206ENST00000543356 VAX2Q9UIW0 290 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 WNK2Q9Y3S1 2297 aa7.34□□□□□ -1.23
GNE-206ENST00000543356 AMY1AP04745 511 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 SRP19P09132 144 aaKnown RBP7.33□□□□□ -1.24
GNE-206ENST00000543356 GATA2P23769 480 aaPredicted RBP7.33□□□□□ -1.24
GNE-206ENST00000543356 ZNF90Q03938 601 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 C1orf194Q5T5A4 169 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 OR1L4Q8NGR5 311 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 GATAD1Q8WUU5 269 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 VPS25Q9BRG1 176 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 THYN1Q9P016 225 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 SPG11Q96JI7 2443 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 IGHV3-21A0A0B4J1V1 117 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 NDUFB8O95169 186 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 IGLC1P0CG04 106 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 TMEM183AQ8IXX5 376 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 WFDC11Q8NEX6 87 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 APCP25054 2843 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.33□□□□□ -1.244e-6■■■■□ 23.2
GNE-206ENST00000543356 CSMD2Q7Z408 3487 aa7.33□□□□□ -1.24
GNE-206ENST00000543356 GCGP01275 180 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 ARL14EPLP0DKL9 152 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 PRRC2AP48634 2157 aaKnown RBP7.32□□□□□ -1.24
GNE-206ENST00000543356 C19orf54Q5BKX5 351 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 FAM78BQ5VT40 261 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 SPATA31B1PQ5VZV4 182 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 UNQ5815/PRO19632Q6UWF5 114 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 PUS1Q9Y606 427 aaKnown RBP eCLIP7.32□□□□□ -1.24
GNE-206ENST00000543356 PLXNB1O43157 2135 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 CENPEQ02224 2701 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 XKRY2A2RUG3 117 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 COX7A2P2O60397 106 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 PLP1P60201 277 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 MEF2BQ02080 365 aaPredicted RBP7.32□□□□□ -1.24
GNE-206ENST00000543356 LY6EQ16553 131 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 ECSCRQ19T08 205 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 DEFB112Q30KQ8 113 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 MIR17HGQ75NE6 70 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 MRPL52Q86TS9 123 aaKnown RBP7.32□□□□□ -1.24
GNE-206ENST00000543356 OR5T1Q8NG75 326 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 TMEM37Q8WXS4 190 aa7.32□□□□□ -1.24
GNE-206ENST00000543356 TECRQ9NZ01 308 aaKnown RBP7.32□□□□□ -1.24
GNE-206ENST00000543356 TRAV30A0A087WSZ9 112 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 MDFIC2A0A1B0GVS7 189 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 SERTM2A0A1B0GWG4 89 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 FCGR2BP31994 310 aaPredicted RBP7.31□□□□□ -1.24
GNE-206ENST00000543356 TAS2R45P59539 299 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 BCL6BQ8N143 479 aaPredicted RBP7.31□□□□□ -1.24
GNE-206ENST00000543356 TEX29Q8N6K0 151 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 PTPN13Q12923 2485 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 DOPEY2Q9Y3R5 2298 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 SH2D7A6NKC9 451 aaPredicted RBP7.31□□□□□ -1.24
GNE-206ENST00000543356 IGHG2P01859 326 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 IGF1P05019 195 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 GCHFRP30047 84 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 MFAP4P55083 255 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 SOHLH1Q5JUK2 328 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 Q6ZVH6 145 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 CYB561D1Q8N8Q1 229 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 VN1R17PQ8TDU5 208 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 AURKAIP1Q9NWT8 199 aaPredicted RBP7.31□□□□□ -1.24
GNE-206ENST00000543356 ARL2-SNX15V9GYD0 113 aa7.31□□□□□ -1.24
GNE-206ENST00000543356 MED13LQ71F56 2210 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms