RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, human

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB6A-208	ENST00000541795	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795		A0A0G2JLM5	398 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	TMEM89	A2RUT3	159 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	FAM181B	A6NEQ2	426 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	PSMB8	P28062	276 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	CD81	P60033	236 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	UBE2L3	P68036	154 aa	Known RBP	13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	SLC35B1	P78383	322 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	USF2	Q15853	346 aa	Predicted RBP	13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	CYB561D1	Q8N8Q1	229 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	PAXX	Q9BUH6	204 aa		13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.69	□□□□□ -0.22
RAB6A-208	ENST00000541795	IGHV3-35	A0A0C4DH35	117 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	CLDN34	H7C241	214 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	CEBPG	P53567	150 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	CST9LP1	Q5W188	147 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	C10orf99	Q6UWK7	81 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	STXBP6	Q8NFX7	210 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	OR51M1	Q9H341	326 aa		13.68	□□□□□ -0.22
RAB6A-208	ENST00000541795	C11orf94	C9JXX5	98 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	PPP5D1	E7EU14	171 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795		H3BRN7	92 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	IGHV3-11	P01762	117 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	PYY	P10082	97 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	FOSL1	P15407	271 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	KIAA0141	Q14154	515 aa	Predicted RBP	13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	LEMD1	Q68G75	181 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	OR4F5	Q8NH21	305 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	ZNF414	Q96IQ9	312 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	OR4F4	Q96R69	305 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	HIVEP2	P31629	2446 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	ARL3	P36405	182 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	ATP5G3	P48201	142 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	REL	Q04864	619 aa	Predicted RBP	13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	SOHLH1	Q5JUK2	328 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	TEX38	Q6PEX7	206 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	S100A7A	Q86SG5	101 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	SUN5	Q8TC36	379 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	ZNF418	Q8TF45	676 aa	Predicted RBP	13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	SHANK2-AS3	Q9BTD1	123 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	ARL2-SNX15	V9GYD0	113 aa		13.67	□□□□□ -0.22
RAB6A-208	ENST00000541795	FAM74A7	A6NL05	159 aa		13.66	□□□□□ -0.22
RAB6A-208	ENST00000541795	TOMM20L	Q6UXN7	152 aa		13.66	□□□□□ -0.22
RAB6A-208	ENST00000541795	SERTAD4	Q9NUC0	356 aa		13.66	□□□□□ -0.22
RAB6A-208	ENST00000541795	BMPR1B	O00238	502 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	NDUFS6	O75380	124 aa	Known RBP	13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	FOXE3	Q13461	319 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	GUCA2B	Q16661	112 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	ZNF343	Q6P1L6	599 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795		Q71RC1	249 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	OR4X2	Q8NGF9	303 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	FXYD5	Q96DB9	178 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	TXNDC17	Q9BRA2	123 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	ZFAND3	Q9H8U3	227 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	RABAC1	Q9UI14	185 aa		13.65	□□□□□ -0.22
RAB6A-208	ENST00000541795	TRBV12-3	P01733	135 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	RNASE1	P07998	156 aa	Known RBP	13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	ELANE	P08246	267 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	GP9	P14770	177 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795		Q6ZSV7	163 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	CCDC28A	Q8IWP9	274 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	SVBP	Q8N300	66 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	CUBN	O60494	3623 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	IGHV3OR16-8	A0A075B7F1	116 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	TMEM250	H0YL14	139 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	PDE6D	O43924	150 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	FAM90A2P	Q658T7	463 aa		13.64	□□□□□ -0.23
RAB6A-208	ENST00000541795	MTOR	P42345	2549 aa		13.63	□□□□□ -0.23
RAB6A-208	ENST00000541795	ZNF98	A6NK75	572 aa		13.63	□□□□□ -0.23
RAB6A-208	ENST00000541795	RPLP1	P05386	114 aa	Known RBP	13.63	□□□□□ -0.23
RAB6A-208	ENST00000541795	HILS1	P60008	231 aa		13.63	□□□□□ -0.23
RAB6A-208	ENST00000541795	TMEM14C	Q9P0S9	112 aa		13.63	□□□□□ -0.23
RAB6A-208	ENST00000541795	FLNB	O75369	2602 aa	Known RBP	13.63	□□□□□ -0.23
RAB6A-208	ENST00000541795		A0A1W2PRE2	83 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	INAFM1	C9JVW0	142 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	CRYBA1	P05813	215 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	RPL15	P61313	204 aa	Known RBP	13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795		F6UZH7	168 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	SNRPC	P09234	159 aa	Known RBP	13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	S100A7	P31151	101 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	FAM209B	Q5JX69	171 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	BPIFA4P	Q86YQ2	179 aa		13.62	□□□□□ -0.23
RAB6A-208	ENST00000541795	NBEAP1	P0C6P0	100 aa		13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	RNF152	Q8N8N0	203 aa		13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	MYOZ3	Q8TDC0	251 aa		13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	BLNK	Q8WV28	456 aa		13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	RPUSD4	Q96CM3	377 aa	Known RBP	13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	OR5B12	Q96R08	314 aa		13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	RNF24	Q9Y225	148 aa		13.61	□□□□□ -0.23
RAB6A-208	ENST00000541795	GGTLC3	B5MD39	225 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	SCO1	O75880	301 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	SNAPIN	O95295	136 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	KLHDC1	Q8N7A1	406 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	PEF1	Q9UBV8	284 aa	Known RBP	13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	SCO2	A0A1W2PP80	73 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	CLPSL1	A2RUU4	121 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	NDUFA4	O00483	81 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms