RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
RAB6A-208ENST00000541795 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAB6A-208ENST00000541795 A0A0G2JLM5 398 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 TMEM89A2RUT3 159 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 FAM181BA6NEQ2 426 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 PSMB8P28062 276 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 CD81P60033 236 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 UBE2L3P68036 154 aaKnown RBP13.69□□□□□ -0.22
RAB6A-208ENST00000541795 SLC35B1P78383 322 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 USF2Q15853 346 aaPredicted RBP13.69□□□□□ -0.22
RAB6A-208ENST00000541795 CYB561D1Q8N8Q1 229 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 PAXXQ9BUH6 204 aa13.69□□□□□ -0.22
RAB6A-208ENST00000541795 CARHSP1Q9Y2V2 147 aaKnown RBP13.69□□□□□ -0.22
RAB6A-208ENST00000541795 IGHV3-35A0A0C4DH35 117 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 CLDN34H7C241 214 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 CEBPGP53567 150 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 CST9LP1Q5W188 147 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 C10orf99Q6UWK7 81 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 OR51M1Q9H341 326 aa13.68□□□□□ -0.22
RAB6A-208ENST00000541795 C11orf94C9JXX5 98 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 PPP5D1E7EU14 171 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 H3BRN7 92 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 IGHV3-11P01762 117 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 PYYP10082 97 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 FOSL1P15407 271 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 KIAA0141Q14154 515 aaPredicted RBP13.67□□□□□ -0.22
RAB6A-208ENST00000541795 LEMD1Q68G75 181 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 OR4F5Q8NH21 305 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 ZNF414Q96IQ9 312 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 OR4F4Q96R69 305 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
RAB6A-208ENST00000541795 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.67□□□□□ -0.22
RAB6A-208ENST00000541795 ARL3P36405 182 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 ATP5G3P48201 142 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
RAB6A-208ENST00000541795 SOHLH1Q5JUK2 328 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 TEX38Q6PEX7 206 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 S100A7AQ86SG5 101 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 ZNF418Q8TF45 676 aaPredicted RBP13.67□□□□□ -0.22
RAB6A-208ENST00000541795 SHANK2-AS3Q9BTD1 123 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 ARL2-SNX15V9GYD0 113 aa13.67□□□□□ -0.22
RAB6A-208ENST00000541795 FAM74A7A6NL05 159 aa13.66□□□□□ -0.22
RAB6A-208ENST00000541795 TOMM20LQ6UXN7 152 aa13.66□□□□□ -0.22
RAB6A-208ENST00000541795 SERTAD4Q9NUC0 356 aa13.66□□□□□ -0.22
RAB6A-208ENST00000541795 BMPR1BO00238 502 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 NDUFS6O75380 124 aaKnown RBP13.65□□□□□ -0.22
RAB6A-208ENST00000541795 FOXE3Q13461 319 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 GUCA2BQ16661 112 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 Q71RC1 249 aaPredicted RBP13.65□□□□□ -0.22
RAB6A-208ENST00000541795 OR4X2Q8NGF9 303 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 FXYD5Q96DB9 178 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 TXNDC17Q9BRA2 123 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 ZFAND3Q9H8U3 227 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
RAB6A-208ENST00000541795 TRBV12-3P01733 135 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 RNASE1P07998 156 aaKnown RBP13.64□□□□□ -0.23
RAB6A-208ENST00000541795 ELANEP08246 267 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 GP9P14770 177 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 Q6ZSV7 163 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 CCDC28AQ8IWP9 274 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 SVBPQ8N300 66 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 CUBNO60494 3623 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 IGHV3OR16-8A0A075B7F1 116 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 TMEM250H0YL14 139 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 PDE6DO43924 150 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
RAB6A-208ENST00000541795 MTORP42345 2549 aa13.63□□□□□ -0.23
RAB6A-208ENST00000541795 ZNF98A6NK75 572 aa13.63□□□□□ -0.23
RAB6A-208ENST00000541795 RPLP1P05386 114 aaKnown RBP13.63□□□□□ -0.23
RAB6A-208ENST00000541795 HILS1P60008 231 aa13.63□□□□□ -0.23
RAB6A-208ENST00000541795 TMEM14CQ9P0S9 112 aa13.63□□□□□ -0.23
RAB6A-208ENST00000541795 FLNBO75369 2602 aaKnown RBP13.63□□□□□ -0.23
RAB6A-208ENST00000541795 A0A1W2PRE2 83 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 CRYBA1P05813 215 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 RPL15P61313 204 aaKnown RBP13.62□□□□□ -0.23
RAB6A-208ENST00000541795 F6UZH7 168 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 SNRPCP09234 159 aaKnown RBP13.62□□□□□ -0.23
RAB6A-208ENST00000541795 S100A7P31151 101 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 FAM209BQ5JX69 171 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 BPIFA4PQ86YQ2 179 aa13.62□□□□□ -0.23
RAB6A-208ENST00000541795 NBEAP1P0C6P0 100 aa13.61□□□□□ -0.23
RAB6A-208ENST00000541795 RNF152Q8N8N0 203 aa13.61□□□□□ -0.23
RAB6A-208ENST00000541795 MYOZ3Q8TDC0 251 aa13.61□□□□□ -0.23
RAB6A-208ENST00000541795 BLNKQ8WV28 456 aa13.61□□□□□ -0.23
RAB6A-208ENST00000541795 RPUSD4Q96CM3 377 aaKnown RBP13.61□□□□□ -0.23
RAB6A-208ENST00000541795 OR5B12Q96R08 314 aa13.61□□□□□ -0.23
RAB6A-208ENST00000541795 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
RAB6A-208ENST00000541795 GGTLC3B5MD39 225 aa13.6□□□□□ -0.23
RAB6A-208ENST00000541795 SCO1O75880 301 aa13.6□□□□□ -0.23
RAB6A-208ENST00000541795 SNAPINO95295 136 aa13.6□□□□□ -0.23
RAB6A-208ENST00000541795 KLHDC1Q8N7A1 406 aa13.6□□□□□ -0.23
RAB6A-208ENST00000541795 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
RAB6A-208ENST00000541795 SCO2A0A1W2PP80 73 aa13.6□□□□□ -0.23
RAB6A-208ENST00000541795 CLPSL1A2RUU4 121 aa13.6□□□□□ -0.23
RAB6A-208ENST00000541795 NDUFA4O00483 81 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms