RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 BMI1P35226 326 aa10.38□□□□□ -0.75
SFSWAP-209ENST00000540469 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
SFSWAP-209ENST00000540469 H3BRM9 83 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 KLK10O43240 276 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 ATP5IP56385 69 aaPredicted RBP10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 JMJD8Q96S16 334 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 NDFIP1Q9BT67 221 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 NCR2O95944 276 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 FXYD7P58549 80 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 SPRR3Q9UBC9 169 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 DMXL1Q9Y485 3027 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 CACNG7P62955 275 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 RIGQ13278 110 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 C17orf58Q2M2W7 97 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 Q9H3A6 140 aa10.37□□□□□ -0.75
SFSWAP-209ENST00000540469 CT45A6P0DMU7 189 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 CT45A5P0DMU8 189 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 CT45A7P0DMV0 189 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 HCP5Q6MZN7 132 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 DUX4L9Q6RFH8 374 aaPredicted RBP10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 VSTM2AQ8TAG5 236 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 ZNF747Q9BV97 191 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 PILRBQ9UKJ0 227 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 CACNA1GO43497 2377 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 LAMTOR5O43504 91 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 GCSHP23434 173 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 CEP250Q9BV73 2442 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 HSD52Q0P140 79 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 ITLN1Q8WWA0 313 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 ASCL2Q99929 193 aa10.36□□□□□ -0.75
SFSWAP-209ENST00000540469 TCRAP04437 139 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 LGALS7P47929 136 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 Q6ZT83 130 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 OR4A5Q8NH83 315 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 NEU4Q8WWR8 484 aaPredicted RBP10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 CCL13Q99616 98 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 MRPL20Q9BYC9 149 aaKnown RBP10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 TANC2Q9HCD6 1990 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 ARMS2P0C7Q2 107 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 DHRS13Q6UX07 377 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 C7orf69Q9H7B7 122 aa10.35□□□□□ -0.75
SFSWAP-209ENST00000540469 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 CT83Q5H943 113 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 WFDC3Q8IUB2 231 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 ZADH2Q8N4Q0 377 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 PLCE1Q9P212 2302 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 ENSAO43768 121 aaKnown RBP10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 AZU1P20160 251 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 LYZP61626 148 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 MEF2CQ06413 473 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 TMEM164Q5U3C3 297 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 PMS2CLQ68D20 193 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 TMEM105Q8N8V8 129 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 IFI27P40305 119 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 FAM216BQ8N7L0 139 aa10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-209ENST00000540469 SMAD7O15105 426 aaKnown RBP10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 CEACAM3P40198 252 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 RBPJQ06330 500 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 OR5AN1Q8NGI8 311 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 E7EUB6 86 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 WT1-ASQ06250 92 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 SPRNQ5BIV9 151 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 OR10X1Q8NGY0 326 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 OSR1Q8TAX0 266 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 ZNF414Q96IQ9 312 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 MRPL36Q9P0J6 103 aaKnown RBP10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 IGKV3-15P01624 115 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 RNFT1Q5M7Z0 435 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 PRSS22Q9GZN4 317 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 NDUFA4L2Q9NRX3 87 aa10.33□□□□□ -0.76
SFSWAP-209ENST00000540469 PPIAL4CA0A0B4J2A2 164 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 LTAP01374 205 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 PPIAL4GP0DN37 164 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 SAMD5Q5TGI4 173 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 SPAARA0A1B0GVQ0 90 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 M0R1B8 84 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 SLC25A17O43808 307 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 CFHR2P36980 270 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 NPFFR1Q9GZQ6 430 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 HAX1O00165 279 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 SMIM13P0DJ93 91 aa10.32□□□□□ -0.76
SFSWAP-209ENST00000540469 Q86TA4 180 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms