RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 GATD1Q8NB37 220 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 RPH3ALQ9UNE2 315 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 SLC25A15Q9Y619 301 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 hADV38S2A0JD32 116 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 CGB1A6NKQ9 187 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 PRR33A8MZF0 331 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 SPRY3O43610 288 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 PLAUP00749 431 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 ZNF883P0CG24 379 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 FAM201AQ5SY85 155 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 OR10X1Q8NGY0 326 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 TMEM190Q8WZ59 177 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 TRGV9Q99603 122 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 GAGE10A6NGK3 116 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 HTR1DP28221 377 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 PRR31Q5SQ13 230 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 OR4C13Q8NGP0 309 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 ZNF747Q9BV97 191 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 DYSFO75923 2080 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 GP9P14770 177 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 ORM2P19652 201 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 GLRXP35754 106 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 CSN1S1P47710 185 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 UFSP1Q6NVU6 142 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 OR1B1Q8NGR6 318 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 Q9H3A6 140 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 AP5S1Q9NUS5 200 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 LINC00312Q9Y6C7 94 aa14.12□□□□□ -0.15
RAB40C-205ENST00000539661 CRYGCP07315 174 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 COL8A1P27658 744 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 MRPL36Q9P0J6 103 aaKnown RBP14.11□□□□□ -0.15
RAB40C-205ENST00000539661 TRBV6-1A0A0K0K1D8 114 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 A0A1B0GW15 77 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 H3BRM9 83 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 Q86TA4 180 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 ZNRD1Q9P1U0 126 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 IGLV3-9A0A075B6K5 115 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 FAM87AP0C7U9 286 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 ZNF138P52744 262 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 PVRIGQ6DKI7 326 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 OR1N2Q8NGR9 330 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 OR10AG1Q8NH19 301 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 CCL13Q99616 98 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 PROCRQ9UNN8 238 aa14.11□□□□□ -0.15
RAB40C-205ENST00000539661 A6NDN8 102 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 PLP1P60201 277 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 RIGQ13278 110 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 HEATR1Q9H583 2144 aaKnown RBP14.1□□□□□ -0.15
RAB40C-205ENST00000539661 A0A1B0GUT8 65 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 C22orf46C9J442 243 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 H0Y8G0 127 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 HES3Q5TGS1 186 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 AP1S3Q96PC3 154 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 MEGF9Q9H1U4 602 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 OTORQ9NRC9 128 aa14.1□□□□□ -0.15
RAB40C-205ENST00000539661 C9orf118A6NHY6 69 aa14.09□□□□□ -0.15
RAB40C-205ENST00000539661 FAM216BQ8N7L0 139 aa14.09□□□□□ -0.15
RAB40C-205ENST00000539661 FER1L6-AS1Q8NA97 138 aa14.09□□□□□ -0.15
RAB40C-205ENST00000539661 MCRIP2Q9BUT9 160 aaKnown RBP14.09□□□□□ -0.15
RAB40C-205ENST00000539661 OVOL3O00110 214 aa14.09□□□□□ -0.15
RAB40C-205ENST00000539661 IGHV3-48P01763 117 aa14.09□□□□□ -0.15
RAB40C-205ENST00000539661 MEF2CQ06413 473 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-205ENST00000539661 SARAFQ96BY9 339 aa14.09□□□□□ -0.15
RAB40C-205ENST00000539661 ZZEF1O43149 2961 aa14.08□□□□□ -0.15
RAB40C-205ENST00000539661 RAI1Q7Z5J4 1906 aaPredicted RBP14.08□□□□□ -0.15
RAB40C-205ENST00000539661 CEP295Q9C0D2 2601 aa14.08□□□□□ -0.15
RAB40C-205ENST00000539661 MUC6Q6W4X9 2439 aa14.08□□□□□ -0.15
RAB40C-205ENST00000539661 FGF6P10767 208 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 HOXB4P17483 251 aaPredicted RBP14.08□□□□□ -0.16
RAB40C-205ENST00000539661 C3orf36Q3SXR2 165 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 FA2HQ7L5A8 372 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 C8orf46Q8TAG6 207 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 C10orf55Q5SWW7 151 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 TEX36Q5VZQ5 186 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 TEX45Q8NA69 505 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 DEFB108BQ8NET1 73 aa14.08□□□□□ -0.16
RAB40C-205ENST00000539661 PPIAL4DF5H284 164 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 IGLV2-23P01705 113 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 CSN3P07498 182 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 TNFAIP6P98066 277 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-205ENST00000539661 TMEM116Q8NCL8 245 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 SIVA1O15304 175 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 PLA2G2CQ5R387 149 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 RPRMLQ8N4K4 120 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 TMEM14CQ9P0S9 112 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 CUL9Q8IWT3 2517 aa14.07□□□□□ -0.16
RAB40C-205ENST00000539661 ANKRD11Q6UB99 2663 aaPredicted RBP14.06□□□□□ -0.16
RAB40C-205ENST00000539661 ICE1Q9Y2F5 2266 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 A0A1W2PPI3 338 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 M0R1B8 84 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 PAX2Q02962 417 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 VMA21Q3ZAQ7 101 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 OR9G4Q8NGQ1 327 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 PRSS3P2Q8NHM4 247 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 G3V4G9 280 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 K7EP34 96 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 Q6AWC8 147 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 BOD1L2Q8IYS8 172 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms