RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 OR4X2Q8NGF9 303 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 OR4A16Q8NH70 328 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 OR1L3Q8NH93 324 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 CCL4L1Q8NHW4 92 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 C8orf46Q8TAG6 207 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 FGFBP3Q8TAT2 258 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF502Q8TBZ5 544 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 CHCHD1Q96BP2 118 aaKnown RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ADTRPQ96IZ2 230 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 LINC00479Q96M42 142 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 PRELID3AQ96N28 172 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 DGAT2Q96PD7 388 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 LINC01587Q99440 93 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 CDX2Q99626 313 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TXNDC17Q9BRA2 123 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ANAPC13Q9BS18 74 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TIMM29Q9BSF4 260 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TTTY13Q9BZ97 58 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 RAB1BQ9H0U4 201 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF442Q9H7R0 627 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 PRTFDC1Q9NRG1 225 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 IDI2-AS1Q9NZ38 188 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 CYSLTR1Q9Y271 337 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 KLF13Q9Y2Y9 288 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 Q9Y3F1 56 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 F11RQ9Y624 299 aaKnown RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 THADAQ6YHU6 1953 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 PCDH15Q96QU1 1955 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ADAMTS9Q9P2N4 1935 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 DOCK7Q96N67 2140 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 IGLV5-45A0A087WSX0 123 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 IGKV2D-26A0A0A0MRZ7 120 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 CCL15-CCL14A0A0B4J2E2 113 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 A0A1W2PPV4 95 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 TCRBV4S1A1TA0A5B7 111 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 FRG2CA6NGY1 282 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 FABP5P3A8MUU1 101 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 C17orf98A8MV24 154 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 H3BMG7 143 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 SYNGR3O43761 229 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 LTAP01374 205 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 IGKV3-11P04433 115 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 OR5AL1P0C617 328 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 CRYGSP22914 178 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 G6PCP35575 357 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 NDUFV3P56181 108 aaKnown RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 ERVK11-1P61568 191 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 LOXL1Q08397 574 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 GAGE2BQ13066 116 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 KIR2DS3Q14952 304 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 PSG5Q15238 335 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 RTL8BQ17RB0 113 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 DEFB110Q30KQ9 67 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 KRTAP27-1Q3LI81 207 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 GAGE2EQ4V326 116 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 GAGE2AQ6NT46 116 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 GFRALQ6UXV0 394 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 LINC00322Q6ZN03 302 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 C16orf47Q6ZP98 133 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 Q71RC1 249 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 FGFRL1Q8N441 504 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 ZADH2Q8N4Q0 377 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 DRAM1Q8N682 238 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 C3orf56Q8N813 242 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 MAPKAPK5-AS1Q8N8E1 139 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 OR9G4Q8NGQ1 327 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 UBALD1Q8TB05 177 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 SSMEM1Q8WWF3 244 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 ST8SIA1Q92185 356 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 TSACCQ96A04 125 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 PTH2Q96A98 100 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 NABP1Q96AH0 204 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 OXGR1Q96P68 337 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 SPXQ9BT56 116 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 MAP1LC3CQ9BXW4 147 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF355PQ9NSJ1 428 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 GAGE2DQ9UEU5 116 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 TCF19Q9Y242 345 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 SPAG17Q6Q759 2223 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 NCOA6Q14686 2063 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-216ENST00000534389 RALGAPA1Q6GYQ0 2036 aa2.51□□□□□ -2.01
CSDE1-216ENST00000534389 MED12LQ86YW9 2145 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 TRBV6-6A0A0A6YYG2 114 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 TRAV24A0A0B4J272 114 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 A0A1B0GWB2 263 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 A0A1W2PQD3 144 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 WI2-2373I1.2A0A1W2PRP0 233 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 A4D1N5 150 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 A8MWL6 223 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 J3QR89 54 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 M0R135 149 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CHEK1O14757 476 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CRLF1O75462 422 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 APOHP02749 345 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CT45A6P0DMU7 189 aa2.5□□□□□ -2.01
CSDE1-216ENST00000534389 CT45A5P0DMU8 189 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms