RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SIGLEC15Q6ZMC9 328 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 RPL15P61313 204 aaKnown RBP12.11□□□□□ -0.47
USP47-207ENST00000527733 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 COL5A1P20908 1838 aaPredicted RBP12.11□□□□□ -0.47
USP47-207ENST00000527733 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
USP47-207ENST00000527733 OR11H6Q8NGC7 330 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 TMEM190Q8WZ59 177 aa12.11□□□□□ -0.47
USP47-207ENST00000527733 PACRGQ96M98 296 aaPredicted RBP12.11□□□□□ -0.47
USP47-207ENST00000527733 PSG8Q9UQ74 426 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 MYO18BQ8IUG5 2567 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 A0A087WWC5 75 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 CD5P06127 495 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 G0S2P27469 103 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 HBBP68871 147 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 C10orf105Q8TEF2 133 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 RPP21Q9H633 154 aaKnown RBP12.1□□□□□ -0.47
USP47-207ENST00000527733 CDC42EP3Q9UKI2 254 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 TOMM40O96008 361 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 TPSG1Q9NRR2 321 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 Q6ZN92 141 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 VN1R17PQ8TDU5 208 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 ASCL2Q99929 193 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
USP47-207ENST00000527733 NEU1Q99519 415 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
USP47-207ENST00000527733 TCF24Q7RTU0 167 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 G3V318 75 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 ASIPP42127 132 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 TUBA4BQ9H853 241 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
USP47-207ENST00000527733 KIAA1644Q3SXP7 199 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 MYOZ3Q8TDC0 251 aa12.09□□□□□ -0.47
USP47-207ENST00000527733 A0A1B0GUT8 65 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 NDUFB8O95169 186 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 Q6AWC8 147 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 PEF1Q9UBV8 284 aaKnown RBP12.08□□□□□ -0.48
USP47-207ENST00000527733 PAX1P15863 534 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 C19orf35Q6ZS72 473 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 A0A1B0GW64 132 aa12.08□□□□□ -0.48
USP47-207ENST00000527733 SRIP30626 198 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 IL15RAQ13261 267 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 TMEM183BQ1AE95 376 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 OVOL1O14753 267 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 NRGNQ92686 78 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 CBLN1P23435 193 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 OSTCQ9NRP0 149 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 GLMPQ8WWB7 406 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 MAP1LC3AQ9H492 121 aa12.07□□□□□ -0.48
USP47-207ENST00000527733 M0R381 172 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
USP47-207ENST00000527733 CHD7Q9P2D1 2997 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 SOX21Q9Y651 276 aaPredicted RBP12.06□□□□□ -0.48
USP47-207ENST00000527733 C9JCJ5 164 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
USP47-207ENST00000527733 YPEL3P61236 119 aaPredicted RBP12.06□□□□□ -0.48
USP47-207ENST00000527733 EXOC3-AS1Q8N2X6 119 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 GRIFINA4D1Z8 144 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 PGPEP1LA6NFU8 196 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
USP47-207ENST00000527733 TRAV9-1A0A075B6T8 112 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 NPIPB5A8MRT5 1133 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 LCNL1Q6ZST4 164 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 C9orf139Q6ZV77 190 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
USP47-207ENST00000527733 NDPQ00604 133 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 FER1L6-AS1Q8NA97 138 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 NPIPB6E9PJ23 425 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 OVOL3O00110 214 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 TMEM249Q2WGJ8 235 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 STHQ8IWL8 128 aa12.05□□□□□ -0.48
USP47-207ENST00000527733 COL4A2P08572 1712 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 C19orf84I3L1E1 186 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
USP47-207ENST00000527733 TRAV21A0A0B4J279 112 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 HIGD1CA8MV81 97 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 TCRAP04437 139 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 ZNF56Q15929 161 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 KCNS1Q96KK3 526 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms