RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 DCANP1Q8TF63 244 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 THEM6Q8WUY1 208 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 AIF1LQ9BQI0 150 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 TMEM126AQ9H061 195 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 CXCL16Q9H2A7 254 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 OR52A1Q9UKL2 312 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 BAIAP2Q9UQB8 552 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 CFAP46Q8IYW2 2715 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 SDK2Q58EX2 2172 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 SMARCA4P51532 1647 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 FLNCQ14315 2725 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 CD109Q6YHK3 1445 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 MYO9BQ13459 2157 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 A0A1B0GVG6 124 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 ARRDC5A6NEK1 342 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 SDHAF1A6NFY7 115 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 TRGC1P0CF51 173 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 PEBP1P30086 187 aaKnown RBP1.94□□□□□ -2.1
SQLE-204ENST00000520493 C1orf140Q5VVS0 124 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 LCN15Q6UWW0 184 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 MBD3L1Q8WWY6 194 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 ISOC1Q96CN7 298 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 HSPB9Q9BQS6 159 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 LAMTOR2Q9Y2Q5 125 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 KIAA2026Q5HYC2 2103 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 NUP210LQ5VU65 1888 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 IGSF10Q6WRI0 2623 aa1.94□□□□□ -2.1
SQLE-204ENST00000520493 ARHGEF28Q8N1W1 1705 aaKnown RBP1.94□□□□□ -2.1
SQLE-204ENST00000520493 CCDC88CQ9P219 2028 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 TECPR2O15040 1411 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 SBF1O95248 1867 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 MKI67P46013 3256 aaKnown RBP1.93□□□□□ -2.1
SQLE-204ENST00000520493 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 NAPSAO96009 420 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 S100A12P80511 92 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 RTL8BQ17RB0 113 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 FKBP1CQ5VVH2 108 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 BRD3OSQ6XYD6 125 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 AAED1Q7RTV5 226 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 CROCCP2Q86T23 111 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 PRR15Q8IV56 129 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 OR4E2Q8NGC2 313 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 OR8B3Q8NGG8 313 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 OR4D11Q8NGI4 311 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 PPTC7Q8NI37 304 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 MRPL32Q9BYC8 188 aaKnown RBP1.93□□□□□ -2.1
SQLE-204ENST00000520493 SPANXCQ9NY87 97 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 TAS2R7Q9NYW3 318 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 COL4A2P08572 1712 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 KIF24Q5T7B8 1368 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 PTPRMP28827 1452 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 STAB1Q9NY15 2570 aa1.93□□□□□ -2.1
SQLE-204ENST00000520493 C2CD3Q4AC94 2353 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 IGLV3-9A0A075B6K5 115 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 TRAV5A0A0B4J249 113 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 ARL5CA6NH57 179 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 J3QQQ9 107 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 SDCBPO00560 298 aaPredicted RBP1.92□□□□□ -2.1
SQLE-204ENST00000520493 KPNA4O00629 521 aaPredicted RBP1.92□□□□□ -2.1
SQLE-204ENST00000520493 GADD45GO95257 159 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 BCL2P10415 239 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 INSL3P51460 131 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 DYNLT3P51808 116 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 RPL26P61254 145 aaKnown RBP1.92□□□□□ -2.1
SQLE-204ENST00000520493 RPS28P62857 69 aaKnown RBP1.92□□□□□ -2.1
SQLE-204ENST00000520493 MYL5Q02045 173 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 ZNF345Q14585 488 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 NNATQ16517 81 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 Q6ZQT0 140 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 ZNF826PQ6ZT77 177 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 WFDC11Q8NEX6 87 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 OR2T10Q8NGZ9 312 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 OR10J5Q8NHC4 309 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 PRADC1Q9BSG0 188 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 RPL26L1Q9UNX3 145 aaKnown RBP1.92□□□□□ -2.1
SQLE-204ENST00000520493 ASB4Q9Y574 426 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 STRCQ7RTU9 1775 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 EML6Q6ZMW3 1958 aa1.92□□□□□ -2.1
SQLE-204ENST00000520493 UBR5O95071 2799 aaPredicted RBP1.91□□□□□ -2.1
SQLE-204ENST00000520493 BCL9LQ86UU0 1499 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 TRGV4A0A0C4DH28 118 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 A0A0G2JQZ4 141 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 TRDV1A0A1B0GX56 115 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 ZNF705FA8MVS1 300 aaPredicted RBP1.91□□□□□ -2.1
SQLE-204ENST00000520493 NDUFB3O43676 98 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 OR2T1O43869 369 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 PGLYRP1O75594 196 aaPredicted RBP1.91□□□□□ -2.1
SQLE-204ENST00000520493 SHBGP04278 402 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 CTSDP07339 412 aaPredicted RBP1.91□□□□□ -2.1
SQLE-204ENST00000520493 CRYGAP11844 174 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 POLR2HP52434 150 aaKnown RBP1.91□□□□□ -2.1
SQLE-204ENST00000520493 GTF2A1P52655 376 aaPredicted RBP1.91□□□□□ -2.1
SQLE-204ENST00000520493 SPANXN5Q5MJ07 72 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 DEFB132Q7Z7B7 95 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 PDZD9Q8IXQ8 264 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 IFT20Q8IY31 132 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 C3orf56Q8N813 242 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 AQP3Q92482 292 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 CCDC115Q96NT0 180 aa1.91□□□□□ -2.1
SQLE-204ENST00000520493 LINC00467Q9BRT7 94 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms